RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 TMPRSS11DO60235 418 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 PRAMEF2O60811 474 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 TTLL1O95922 423 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 CENPBP07199 599 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-212ENST00000557477 DLDP09622 509 aaKnown RBP5.25□□□□□ -1.57
PRPF39-212ENST00000557477 NDUFB7P17568 137 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 RXRAP19793 462 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 PLA2G5P39877 138 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 AVPR1BP47901 424 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 AARSP49588 968 aaKnown RBP eCLIP5.25□□□□□ -1.57
PRPF39-212ENST00000557477 PAPOLAP51003 745 aaKnown RBP5.25□□□□□ -1.57
PRPF39-212ENST00000557477 HSPA2P54652 639 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 ACTR2P61160 394 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 LMAN2Q12907 356 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 PDCLQ13371 301 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 DNASE1L3Q13609 305 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 SMAD1Q15797 465 aaKnown RBP5.25□□□□□ -1.57
PRPF39-212ENST00000557477 AAK1Q2M2I8 961 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 ANKRD40Q6AI12 368 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 CCDC70Q6NSX1 233 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 Q6ZPA2 131 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 ZNF627Q7L945 461 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 WDR53Q7Z5U6 358 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-212ENST00000557477 PNPLA1Q8N8W4 532 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 PNISRQ8TF01 805 aaKnown RBP5.25□□□□□ -1.57
PRPF39-212ENST00000557477 HERVK_113Q902F9 699 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 LARP4BQ92615 738 aaKnown RBP5.25□□□□□ -1.57
PRPF39-212ENST00000557477 USP13Q92995 863 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-212ENST00000557477 TBATAQ96M53 351 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 COG8Q96MW5 612 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 CHODLQ9H9P2 273 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 RXFP3Q9NSD7 469 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 NDUFAF4Q9P032 175 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 FOXJ2Q9P0K8 574 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 PDP2Q9P2J9 529 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 RAB21Q9UL25 225 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 ADAMTS5Q9UNA0 930 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 MYRFQ9Y2G1 1151 aa5.25□□□□□ -1.57
PRPF39-212ENST00000557477 UBE2J1Q9Y385 318 aaPredicted RBP5.25□□□□□ -1.57
PRPF39-212ENST00000557477 COL4A3Q01955 1670 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 FAM90A20PA6NIJ5 464 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 MGST3O14880 152 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 MATN3O15232 486 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 SUV39H1O43463 412 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 WDHD1O75717 1129 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 LARGE1O95461 756 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 MBPP02686 304 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 ADH4P08319 380 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 NPSP0C0P6 89 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 TMIGD3P0DMS9 266 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 EEFSECP57772 596 aaKnown RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 RAE1P78406 368 aaKnown RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 RNASELQ05823 741 aaKnown RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 EFR3AQ14156 821 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 FAM187BQ17R55 369 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 ZXDCQ2QGD7 858 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 RNASE12Q5GAN4 147 aaKnown RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 DGAT2L7PQ6IED9 249 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 ANKRD16Q6P6B7 361 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 KIRREL2Q6UWL6 708 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 IL17REQ8NFR9 667 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 ABHD11Q8NFV4 315 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 CEP70Q8NHQ1 597 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 SDCCAG3Q96C92 435 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 REXO5Q96IC2 774 aaKnown RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 PDLIM2Q96JY6 352 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 MACROD1Q9BQ69 325 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 THAP7Q9BT49 309 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 MAF1Q9H063 256 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 SNX15Q9NRS6 342 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 LIN7CQ9NUP9 197 aaKnown RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 TRPC5Q9UL62 973 aaPredicted RBP5.24□□□□□ -1.57
PRPF39-212ENST00000557477 VPS4AQ9UN37 437 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 CRYL1Q9Y2S2 319 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 FANCAO15360 1455 aa5.24□□□□□ -1.57
PRPF39-212ENST00000557477 ARHGEF40Q8TER5 1519 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 QSOX1O00391 747 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 NKX2-8O15522 239 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 HEXIM1O94992 359 aaKnown RBP5.23□□□□□ -1.57
PRPF39-212ENST00000557477 ZNF37AP17032 561 aaPredicted RBP5.23□□□□□ -1.57
PRPF39-212ENST00000557477 CD53P19397 219 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 DRD4P21917 467 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 GALNSP34059 522 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 IGHMBP2P38935 993 aaKnown RBP5.23□□□□□ -1.57
PRPF39-212ENST00000557477 CDK7P50613 346 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 CCT8P50990 548 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 RPL15P61313 204 aaKnown RBP5.23□□□□□ -1.57
PRPF39-212ENST00000557477 GPC5P78333 572 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 TXNL4AP83876 142 aaKnown RBP5.23□□□□□ -1.57
PRPF39-212ENST00000557477 ZNF169Q14929 603 aaPredicted RBP5.23□□□□□ -1.57
PRPF39-212ENST00000557477 ZNF569Q5MCW4 686 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 HECTD2Q5U5R9 776 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 JAKMIP3Q5VZ66 844 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 ACSM6Q6P461 480 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 CRIP3Q6Q6R5 217 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 SYNE3Q6ZMZ3 975 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 ANKS1BQ7Z6G8 1248 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 TMTC1Q8IUR5 882 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 EDC3Q96F86 508 aaKnown RBP5.23□□□□□ -1.57
PRPF39-212ENST00000557477 MMS19Q96T76 1030 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms