RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ADORA2BP29275 332 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 RACK1P63244 317 aaKnown RBP13.16□□□□□ -0.3
PSEN1-221ENST00000557293 HES3Q5TGS1 186 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 SERPINA13PQ6UXR4 307 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 ERICH1Q86X53 443 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 SPACA3Q8IXA5 215 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 CACTIN-AS1Q8N1I8 211 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 CPXM2Q8N436 756 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 PARD3BQ8TEW8 1205 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 TWNKQ96RR1 684 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 ELF4Q99607 663 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-221ENST00000557293 SEMA4CQ9C0C4 833 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 CIPCQ9C0C6 399 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 BTBD1Q9H0C5 482 aa13.16□□□□□ -0.3
PSEN1-221ENST00000557293 ARID1BQ8NFD5 2236 aaPredicted RBP13.16□□□□□ -0.3
PSEN1-221ENST00000557293 A0A1W2PR77 199 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 LRRIQ3A6PVS8 624 aaPredicted RBP13.15□□□□□ -0.3
PSEN1-221ENST00000557293 BRINP1O60477 761 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 PHACTR2O75167 634 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 HMBSP08397 361 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 CDK4P11802 303 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 HLA-FP30511 346 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 CORO1AP31146 461 aaKnown RBP13.15□□□□□ -0.3
PSEN1-221ENST00000557293 HNF1BP35680 557 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 COG7P83436 770 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 EHHADHQ08426 723 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 CCDC173Q0VFZ6 552 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 BNIP3Q12983 259 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 NCOA4Q13772 614 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 KCNJ12Q14500 433 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 ZNF699Q32M78 642 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 KIAA0895LQ68EN5 471 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 FAM173BQ6P4H8 233 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 KANSL1Q7Z3B3 1105 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 CCDC186Q7Z3E2 898 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 ADIPOR2Q86V24 386 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 UNC93AQ86WB7 457 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 DENND1CQ8IV53 801 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 ENGASEQ8NFI3 743 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 CYB5D2Q8WUJ1 264 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 JAKMIP2Q96AA8 810 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 TMEM176AQ96HP8 235 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 DCLK3Q9C098 648 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 MTG2Q9H4K7 406 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 KBTBD4Q9NVX7 518 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 CLIC5Q9NZA1 410 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 NAGPAQ9UK23 515 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 PCDHA5Q9Y5H7 936 aa13.15□□□□□ -0.3
PSEN1-221ENST00000557293 PLXNA2O75051 1894 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 COL6A6A6NMZ7 2263 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 A0A1W2PPC4 97 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 PYCARD-AS1I3L0S3 204 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 FAM200BP0CF97 657 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 HOXD9P28356 352 aaPredicted RBP13.14□□□□□ -0.31
PSEN1-221ENST00000557293 STAT6P42226 847 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 GALCP54803 685 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 CXADRP78310 365 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 ZBTB16Q05516 673 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 EFEMP1Q12805 493 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 E2F5Q15329 346 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 E2F4Q16254 413 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 FMNL3Q8IVF7 1028 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 NELFCDQ8IXH7 590 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 C12orf56Q8IXR9 622 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 EID2Q8N6I1 236 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 PDILTQ8N807 584 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 RFFLQ8WZ73 363 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 BAP1Q92560 729 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 CYFIP2Q96F07 1278 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 WBP1Q96G27 269 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 SLC6A18Q96N87 628 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 SGK2Q9HBY8 427 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 PNPLA8Q9NP80 782 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 SERGEFQ9UGK8 458 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 RASAL2Q9UJF2 1139 aa13.14□□□□□ -0.31
PSEN1-221ENST00000557293 ERVH48-1M5A8F1 160 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 ITGAVP06756 1048 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 ASPAP45381 313 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 PSEN1P49768 467 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 BCAT1P54687 386 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 SNRPFP62306 86 aaKnown RBP13.13□□□□□ -0.31
PSEN1-221ENST00000557293 DLG4P78352 724 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 PDE4CQ08493 712 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 KCNH2Q12809 1159 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 BIRC3Q13489 604 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 INAVAQ3KP66 663 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 TBC1D25Q3MII6 688 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 SPOPLQ6IQ16 392 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 CNNM4Q6P4Q7 775 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 CHST9Q7L1S5 443 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.13□□□□□ -0.31
PSEN1-221ENST00000557293 DDI1Q8WTU0 396 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 MYO19Q96H55 970 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 ACE2Q9BYF1 805 aaPredicted RBP13.13□□□□□ -0.31
PSEN1-221ENST00000557293 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
PSEN1-221ENST00000557293 CAPN8A6NHC0 703 aa13.12□□□□□ -0.31
PSEN1-221ENST00000557293 ASS1P00966 412 aaKnown RBP13.12□□□□□ -0.31
PSEN1-221ENST00000557293 DNTTP04053 509 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms