RNA–Protein interactions for RNA: ENST00000557057.5

ALKBH1-204, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

TSL 3

Gene ALKBH1, Length 1,750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-204ENST00000557057 FBXO22Q8NEZ5 403 aa18.58■□□□□ 0.56
ALKBH1-204ENST00000557057 CPT1BQ92523 772 aa18.58■□□□□ 0.56
ALKBH1-204ENST00000557057 PRCCQ92733 491 aaPredicted RBP18.58■□□□□ 0.56
ALKBH1-204ENST00000557057 SPATA17Q96L03 361 aa18.58■□□□□ 0.56
ALKBH1-204ENST00000557057 QKIQ96PU8 341 aaKnown RBP eCLIP18.58■□□□□ 0.56
ALKBH1-204ENST00000557057 TMBIM4Q9HC24 238 aa18.58■□□□□ 0.56
ALKBH1-204ENST00000557057 ARHGEF38Q9NXL2 777 aa18.58■□□□□ 0.56
ALKBH1-204ENST00000557057 SLC27A5Q9Y2P5 690 aa18.58■□□□□ 0.56
ALKBH1-204ENST00000557057 BACE2Q9Y5Z0 518 aa18.58■□□□□ 0.56
ALKBH1-204ENST00000557057 CDY1Q9Y6F8 540 aa18.58■□□□□ 0.56
ALKBH1-204ENST00000557057 GOLGA6L10A6NI86 522 aa18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 DCLK1O15075 740 aa18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 WDR5P61964 334 aaKnown RBP18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 PAFAH1B3Q15102 231 aaKnown RBP18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 BRMS1LQ5PSV4 323 aa18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 HOOK3Q86VS8 718 aa18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 TMEM199Q8N511 208 aa18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 NAT8LQ8N9F0 302 aa18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 PKNOX2Q96KN3 472 aa18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 TMEM106CQ9BVX2 250 aa18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 DNAJC17Q9NVM6 304 aaKnown RBP18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 OSER1Q9NX31 292 aa18.57■□□□□ 0.56
ALKBH1-204ENST00000557057 MKI67P46013 3256 aaKnown RBP18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 GOLGA6CA6NDK9 693 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 HACD1B0YJ81 288 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 SMAPO00193 183 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 MFSD11O43934 449 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 SOAT2O75908 522 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 RTN3O95197 1032 aaPredicted RBP18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 SHBGP04278 402 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 MYZAPP0CAP1 466 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 GOLGA6DP0CG33 693 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 ACTN2P35609 894 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 PLXNA3P51805 1871 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 GYS2P54840 703 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 TPI1P60174 286 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 GABPB1Q06547 395 aaPredicted RBP18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 IFFO1Q0D2I5 559 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 PSMD5Q16401 504 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 SPOUT1Q5T280 376 aaKnown RBP18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 TMCO2Q7Z6W1 182 aaPredicted RBP18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 CASP10Q92851 521 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 RNF34Q969K3 372 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 RBM15Q96T37 977 aaKnown RBP eCLIP18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 SEPT5Q99719 369 aaPredicted RBP18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 TMEM51Q9NW97 253 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 COMMD8Q9NX08 183 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 GOLGA6AQ9NYA3 693 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 PAK5Q9P286 719 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 SFMBT1Q9UHJ3 866 aa18.56■□□□□ 0.56
ALKBH1-204ENST00000557057 WDR27A2RRH5 827 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 ADAM12O43184 909 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 TTC4O95801 387 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 YWHAQP27348 245 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 DUSP4Q13115 394 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 FAM117BQ6P1L5 589 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 MSANTD2Q6P1R3 559 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 CMTR2Q8IYT2 770 aaKnown RBP18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 SLC39A11Q8N1S5 342 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 GPR152Q8TDT2 470 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 ZNF558Q96NG5 402 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 EPAS1Q99814 870 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 OSBPL2Q9H1P3 480 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 GMIPQ9P107 970 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 OR12D3Q9UGF7 316 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 MYO16Q9Y6X6 1858 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 BAIAP3O94812 1187 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 SOD2P04179 222 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 ERCC2P18074 760 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 CCR1P32246 355 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 RPL10AP62906 217 aaKnown RBP18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 ANKRD22Q5VYY1 191 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 LRRN4Q8WUT4 740 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 TFB1MQ8WVM0 346 aaKnown RBP18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 FBXO32Q969P5 355 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 ATP6V1G3Q96LB4 118 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 SERPINB11Q96P15 392 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 HAPLN3Q96S86 360 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 PHACTR1Q9C0D0 580 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 NINJ2Q9NZG7 142 aa18.55■□□□□ 0.56
ALKBH1-204ENST00000557057 MSI1O43347 362 aaKnown RBP18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 ACRP10323 421 aa18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 BASP1P80723 227 aaKnown RBP18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 BTG3Q14201 252 aaPredicted RBP18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 PPP2R5DQ14738 602 aa18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 KRT71Q3SY84 523 aa18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 KIAA1841Q6NSI8 718 aa18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 C4orf22Q6V702 233 aa18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 TMEM169Q96HH4 297 aa18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 TMEM109Q9BVC6 243 aa18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 CLIC5Q9NZA1 410 aa18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 ADAM21Q9UKJ8 722 aa18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 NUDT5Q9UKK9 219 aa18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 SNX10Q9Y5X0 201 aa18.54■□□□□ 0.56
ALKBH1-204ENST00000557057 HMGB1P1B2RPK0 211 aaPredicted RBP18.53■□□□□ 0.56
ALKBH1-204ENST00000557057 GCATO75600 419 aa18.53■□□□□ 0.56
ALKBH1-204ENST00000557057 TMEM63AO94886 807 aa18.53■□□□□ 0.56
ALKBH1-204ENST00000557057 LRIG2O94898 1065 aa18.53■□□□□ 0.56
ALKBH1-204ENST00000557057 ACSL3O95573 720 aa18.53■□□□□ 0.56
ALKBH1-204ENST00000557057 RPL17P18621 184 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms