RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 LSM7Q9UK45 103 aaKnown RBP11.7□□□□□ -0.54
FOXN3-212ENST00000556541 USP18Q9UMW8 372 aa11.7□□□□□ -0.54
FOXN3-212ENST00000556541 CPQQ9Y646 472 aa11.7□□□□□ -0.54
FOXN3-212ENST00000556541 H3BQ06 376 aaPredicted RBP11.69□□□□□ -0.54
FOXN3-212ENST00000556541 KIF2AO00139 706 aaPredicted RBP11.69□□□□□ -0.54
FOXN3-212ENST00000556541 LEFTY2O00292 366 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 GFRA2O00451 464 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 PRPSAP2O60256 369 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 PALMO75781 387 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 GJA1P17302 382 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 COMTP21964 271 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 FCARP24071 287 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 CTNNA1P35221 906 aaKnown RBP11.69□□□□□ -0.54
FOXN3-212ENST00000556541 ADRA1BP35368 520 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 DEKP35659 375 aaKnown RBP11.69□□□□□ -0.54
FOXN3-212ENST00000556541 HCAR3P49019 387 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 ATP11AP98196 1134 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 FCHO2Q0JRZ9 810 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 SKIV2LQ15477 1246 aaKnown RBP11.69□□□□□ -0.54
FOXN3-212ENST00000556541 CCDC85BQ15834 202 aaPredicted RBP11.69□□□□□ -0.54
FOXN3-212ENST00000556541 DPYSL2Q16555 572 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 ERMARDQ5T6L9 678 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 RNF43Q68DV7 783 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 POTEHQ6S545 545 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 EP400NLQ6ZTU2 488 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 HES6Q96HZ4 224 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 BTBD6Q96KE9 485 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 ZSWIM3Q96MP5 696 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 MYADMQ96S97 322 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 SLITRK6Q9H5Y7 841 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 DDX56Q9NY93 547 aaKnown RBP11.69□□□□□ -0.54
FOXN3-212ENST00000556541 AMFRQ9UKV5 643 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 FZD10Q9ULW2 581 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.69□□□□□ -0.54
FOXN3-212ENST00000556541 JRKLQ9Y4A0 524 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 PCDHA3Q9Y5H8 950 aa11.69□□□□□ -0.54
FOXN3-212ENST00000556541 CHD5Q8TDI0 1954 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 USP27XA6NNY8 438 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 MSI1O43347 362 aaKnown RBP11.68□□□□□ -0.54
FOXN3-212ENST00000556541 SPOPO43791 374 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 ACSL4O60488 711 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 PRAMEF12O95522 483 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 HOXC13P31276 330 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 L1CAMP32004 1257 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 PTPN7P35236 360 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 SLC11A2P49281 568 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 MLLT6P55198 1093 aaPredicted RBP11.68□□□□□ -0.54
FOXN3-212ENST00000556541 NAP1L1P55209 391 aaKnown RBP11.68□□□□□ -0.54
FOXN3-212ENST00000556541 ZXDBP98169 803 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 SEMA3BQ13214 749 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 NME3Q13232 169 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 PDK2Q15119 407 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 CDO1Q16878 200 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 ZC3H12AQ5D1E8 599 aaKnown RBP11.68□□□□□ -0.54
FOXN3-212ENST00000556541 EFHC2Q5JST6 749 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 FAM78AQ5JUQ0 283 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 SH3PXD2AQ5TCZ1 1133 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 MEI1Q5TIA1 1274 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 MANEALQ5VSG8 457 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 NYAP1Q6ZVC0 841 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 PEX26Q7Z412 305 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 MIB1Q86YT6 1006 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 MFSD6LQ8IWD5 586 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 KATNAL2Q8IYT4 538 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 TDRD5Q8NAT2 981 aaKnown RBP11.68□□□□□ -0.54
FOXN3-212ENST00000556541 SH3RF2Q8TEC5 729 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 ING5Q8WYH8 240 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 CYP2S1Q96SQ9 504 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 PRMT1Q99873 361 aaKnown RBP11.68□□□□□ -0.54
FOXN3-212ENST00000556541 APOL5Q9BWW9 433 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 TKTL2Q9H0I9 626 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 ZFP14Q9HCL3 533 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 TRMT1Q9NXH9 659 aaKnown RBP11.68□□□□□ -0.54
FOXN3-212ENST00000556541 IGSF9Q9P2J2 1179 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 THEGQ9P2T0 379 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 PPARGC1AQ9UBK2 798 aaKnown RBP11.68□□□□□ -0.54
FOXN3-212ENST00000556541 NUDT5Q9UKK9 219 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 EFR3BQ9Y2G0 817 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 PRUNE2Q8WUY3 3088 aa11.68□□□□□ -0.54
FOXN3-212ENST00000556541 COL4A2P08572 1712 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 IGLV3-10A0A075B6K4 115 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 FAM170AA1A519 330 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 CES2O00748 559 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 KLKB1P03952 638 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 PRLRP16471 622 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 IL1R2P27930 398 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 CORO1AP31146 461 aaKnown RBP11.67□□□□□ -0.54
FOXN3-212ENST00000556541 GBP2P32456 591 aaPredicted RBP11.67□□□□□ -0.54
FOXN3-212ENST00000556541 CHKAP35790 457 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 PEX5P50542 639 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 ARSEP51690 589 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 TAS2R40P59535 323 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 COPS2P61201 443 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 ETF1P62495 437 aaKnown RBP11.67□□□□□ -0.54
FOXN3-212ENST00000556541 HTR4Q13639 388 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 TAZQ16635 292 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 MPP7Q5T2T1 576 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 ADGRF1Q5T601 910 aa11.67□□□□□ -0.54
FOXN3-212ENST00000556541 TTC39BQ5VTQ0 682 aaPredicted RBP11.67□□□□□ -0.54
FOXN3-212ENST00000556541 PTCRAQ6ISU1 281 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms