RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 FAM90A9PA6NNJ1 464 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 FAM90A5PA8MXJ8 464 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 M0QYT0 321 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 PEX14O75381 377 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 CSTBP04080 98 aaKnown RBP5.25□□□□□ -1.57
SCFD1-221ENST00000556534 FAM90A15PP0C7V4 464 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 FAM90A14PP0C7W9 464 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 PRR35P0CG20 571 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 THBS4P35443 961 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 ARHGAP25P42331 645 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 SSBP2P81877 361 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-221ENST00000556534 BIRC2Q13490 618 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 BLMHQ13867 455 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 BTBD16Q32M84 506 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 TRIM60Q495X7 471 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 C10orf62Q5T681 223 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-221ENST00000556534 SLC18B1Q6NT16 456 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 RINT1Q6NUQ1 792 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 ATG16L2Q8NAA4 619 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 IGFBPL1Q8WX77 278 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 ASB12Q8WXK4 309 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 PMM1Q92871 262 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 ELOVL1Q9BW60 279 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 GATA5Q9BWX5 397 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-221ENST00000556534 NUAK2Q9H093 628 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 MAFFQ9ULX9 164 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 PCDHB7Q9Y5E2 793 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 COMMD10Q9Y6G5 202 aa5.25□□□□□ -1.57
SCFD1-221ENST00000556534 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-221ENST00000556534 KIF28PB7ZC32 967 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 FCHO1O14526 889 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 NKX2-8O15522 239 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 LDHAP00338 332 aaKnown RBP5.24□□□□□ -1.57
SCFD1-221ENST00000556534 IDUAP35475 653 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 PNLIPRP1P54315 467 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 FAM3BP58499 235 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-221ENST00000556534 YPEL5P62699 121 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 CFHR1Q03591 330 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 CBFBQ13951 182 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 DAZAP2Q15038 168 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-221ENST00000556534 AAK1Q2M2I8 961 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 ZNF626Q68DY1 528 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 MIS18BP1Q6P0N0 1132 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 RFX6Q8HWS3 928 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 LAS2Q8IYD9 372 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 ENAHQ8N8S7 591 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-221ENST00000556534 WDR60Q8WVS4 1066 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 RSC1A1Q92681 617 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 TRMT61AQ96FX7 289 aaKnown RBP5.24□□□□□ -1.57
SCFD1-221ENST00000556534 P2RY11Q96G91 374 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 FAR2Q96K12 515 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 FAM118BQ9BPY3 351 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 TM2D2Q9BX73 214 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 AGO4Q9HCK5 861 aaKnown RBP5.24□□□□□ -1.57
SCFD1-221ENST00000556534 MLXIPLQ9NP71 852 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 ASNSD1Q9NWL6 643 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 ZBTB1Q9Y2K1 713 aa5.24□□□□□ -1.57
SCFD1-221ENST00000556534 DNAJC9-AS1A6NH13 148 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 E5RJQ4 531 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 SLC3A2P08195 630 aaKnown RBP5.23□□□□□ -1.57
SCFD1-221ENST00000556534 ITGA2BP08514 1039 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 GYS1P13807 737 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 VEGFAP15692 232 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-221ENST00000556534 ATP5F1P24539 256 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-221ENST00000556534 TACR3P29371 465 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 SLC8A1P32418 973 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 HOXD12P35452 270 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 STAT6P42226 847 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 ABCG1P45844 678 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 VPS41P49754 854 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 AGTR2P50052 363 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 ZNF84P51523 738 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 DMWDQ09019 674 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 OS9Q13438 667 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-221ENST00000556534 TRIM14Q14142 442 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 SRSF7Q16629 238 aaKnown RBP eCLIP5.23□□□□□ -1.57
SCFD1-221ENST00000556534 PFKFB3Q16875 520 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-221ENST00000556534 FAM83BQ5T0W9 1011 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 SLC2A7Q6PXP3 512 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 STT3BQ8TCJ2 826 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 ZNF845Q96IR2 970 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-221ENST00000556534 FCRL5Q96RD9 977 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 SENP7Q9BQF6 1050 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 RTKNQ9BST9 563 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 MECRQ9BV79 373 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 PRSS22Q9GZN4 317 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 ARL8BQ9NVJ2 186 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 DACT1Q9NYF0 836 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 LRFN1Q9P244 771 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 GRHPRQ9UBQ7 328 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 NFU1Q9UMS0 254 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 CNTN6Q9UQ52 1028 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 COL3A1P02461 1466 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-221ENST00000556534 ZNF804BA4D1E1 1349 aa5.23□□□□□ -1.57
SCFD1-221ENST00000556534 CYP2D7A0A087X1C5 515 aa5.22□□□□□ -1.57
SCFD1-221ENST00000556534 SLC38A8A6NNN8 435 aa5.22□□□□□ -1.57
SCFD1-221ENST00000556534 TTC34A8MYJ7 566 aa5.22□□□□□ -1.57
SCFD1-221ENST00000556534 DSCR3O14972 297 aa5.22□□□□□ -1.57
SCFD1-221ENST00000556534 KAT7O95251 611 aa5.22□□□□□ -1.57
SCFD1-221ENST00000556534 KELP23276 732 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms