RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PRAMEF14Q5SWL7 426 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 DENND1CQ8IV53 801 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 CYB5D2Q8WUJ1 264 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 SKA1Q96BD8 255 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 CDK5RAP1Q96SZ6 601 aaKnown RBP14.61□□□□□ -0.07
ACTN1-219ENST00000556432 CLEC4EQ9ULY5 219 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 PLA2G4CQ9UP65 541 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 HECTD1Q9ULT8 2610 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 A0A087X0B3 334 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 A0A1B0GTQ1 180 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 TGFB1I1O43294 461 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 TSPAN3O60637 253 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 EXOC3O60645 756 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 C1SP09871 688 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 RABEP1Q15276 862 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 FAM26FQ5R3K3 315 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 CLEC20AQ6ZU45 233 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 RSRC2Q7L4I2 434 aaKnown RBP14.6□□□□□ -0.07
ACTN1-219ENST00000556432 EID2Q8N6I1 236 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 SNIP1Q8TAD8 396 aaKnown RBP14.6□□□□□ -0.07
ACTN1-219ENST00000556432 FGF11Q92914 225 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 SLC6A18Q96N87 628 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 SLC2A11Q9BYW1 496 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 NRSN2Q9GZP1 204 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 VRTNQ9H8Y1 702 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 AASDHPPTQ9NRN7 309 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 AGO1Q9UL18 857 aaKnown RBP14.6□□□□□ -0.07
ACTN1-219ENST00000556432 STRIP2Q9ULQ0 834 aa14.6□□□□□ -0.07
ACTN1-219ENST00000556432 MYO18BQ8IUG5 2567 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 PAPSS1O43252 624 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-219ENST00000556432 STX6O43752 255 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 BRINP1O60477 761 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 NEFLP07196 543 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 ACTN2P35609 894 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 ACADVLP49748 655 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 PSEN1P49768 467 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 RACK1P63244 317 aaKnown RBP14.59□□□□□ -0.07
ACTN1-219ENST00000556432 BMT2Q1RMZ1 405 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 TMEM215Q68D42 235 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 TMEM176AQ96HP8 235 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 LGMNQ99538 433 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 ELF4Q99607 663 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-219ENST00000556432 LRRC27Q9C0I9 530 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 GZF1Q9H116 711 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-219ENST00000556432 SGK2Q9HBY8 427 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 NCKAP1Q9Y2A7 1128 aa14.59□□□□□ -0.07
ACTN1-219ENST00000556432 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-219ENST00000556432 CYSRT1A8MQ03 144 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 HHLA1C9JL84 531 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 VILLO15195 856 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 AP3M2P53677 418 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 RPS14P62263 151 aaKnown RBP14.58□□□□□ -0.08
ACTN1-219ENST00000556432 TLE3Q04726 772 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 ZBTB16Q05516 673 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 RTP5Q14D33 572 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 ZNF776Q68DI1 518 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-219ENST00000556432 KIAA0895LQ68EN5 471 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 CHST9Q7L1S5 443 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 EPM2AIP1Q7L775 607 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-219ENST00000556432 CCDC186Q7Z3E2 898 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 SCD5Q86SK9 330 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 UNC93AQ86WB7 457 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 SPACA3Q8IXA5 215 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 CRYBG2Q8N1P7 616 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 ZNF507Q8TCN5 953 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 CYFIP2Q96F07 1278 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 NAF1Q96HR8 494 aaKnown RBP14.58□□□□□ -0.08
ACTN1-219ENST00000556432 HNRNPABQ99729 332 aaKnown RBP14.58□□□□□ -0.08
ACTN1-219ENST00000556432 TNMDQ9H2S6 317 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 FBRSQ9HAH7 460 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 MARCH2Q9P0N8 246 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 UBE4BO95155 1302 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 MGAQ8IWI9 3026 aa14.58□□□□□ -0.08
ACTN1-219ENST00000556432 SLC12A8A0AV02 714 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 LRRIQ3A6PVS8 624 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-219ENST00000556432 ERVH48-1M5A8F1 160 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 IGHV4-34P06331 123 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 ARRB1P49407 418 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-219ENST00000556432 KIF11P52732 1056 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 SNRPFP62306 86 aaKnown RBP14.57□□□□□ -0.08
ACTN1-219ENST00000556432 SGSM1Q2NKQ1 1148 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 FBXL19Q6PCT2 694 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 CPXM2Q8N436 756 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 RBBP8NLQ8NC74 664 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-219ENST00000556432 WFIKKN2Q8TEU8 576 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 GOLGA1Q92805 767 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 TMEM245Q9H330 911 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 CLMPQ9H6B4 373 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 PNPLA8Q9NP80 782 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 PRSS16Q9NQE7 514 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 GDF3Q9NR23 364 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 ABCB8Q9NUT2 735 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 CLIC5Q9NZA1 410 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 SPTA1P02549 2419 aa14.57□□□□□ -0.08
ACTN1-219ENST00000556432 COL5A1P20908 1838 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-219ENST00000556432 A0A1W2PPC4 97 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 PYCARD-AS1I3L0S3 204 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 YKT6O15498 198 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 VNN1O95497 513 aa14.56□□□□□ -0.08
ACTN1-219ENST00000556432 GLDCP23378 1020 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms