RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CDADC1Q9BWV3 514 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 LGR4Q9BXB1 951 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 C2orf40Q9H1Z8 148 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 CXCL16Q9H2A7 254 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 CNTD2Q9H8S5 307 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 THG1LQ9NWX6 298 aaKnown RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 GTSE1Q9NYZ3 720 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 FBXL5Q9UKA1 691 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 TMA7Q9Y2S6 64 aaKnown RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 CNOT1A5YKK6 2376 aaKnown RBP5.27□□□□□ -1.57
ATXN3-239ENST00000556315 F5P12259 2224 aa5.27□□□□□ -1.57
ATXN3-239ENST00000556315 C2orf16Q68DN1 1984 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 TRBV23OR9-2A0A075B6M9 112 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 SMIM28A0A1B0GU29 152 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 LNP1A1A4G5 178 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 LRRIQ4A6NIV6 560 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 EIF4E1BA6NMX2 242 aaKnown RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 CDX4O14627 284 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 TRDMT1O14717 391 aaKnown RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 DCLK1O15075 740 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 MEFVO15553 781 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 SLC37A4O43826 429 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 FGF19O95750 216 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 SNRPB2P08579 225 aaKnown RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 IFNGR1P15260 489 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 GCFC2P16383 781 aaKnown RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 DRD1P21728 446 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 MARCKSP29966 332 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 VIPR1P32241 457 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 RPL9P32969 192 aaKnown RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 ALDH1A3P47895 512 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 EPHB3P54753 998 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 ERVFRD-1P60508 538 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 CYP4A11Q02928 519 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 SCRN1Q12765 414 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 SLC14A2Q15849 920 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 MAPK6Q16659 721 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 INF2Q27J81 1249 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 UAP1L1Q3KQV9 507 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 ADCK5Q3MIX3 580 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 DCAF4L1Q3SXM0 396 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 FBXO43Q4G163 708 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 USP39Q53GS9 565 aaKnown RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 ARHGAP15Q53QZ3 475 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 XKR4Q5GH76 650 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 NCAPH2Q6IBW4 605 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 ZNF280DQ6N043 979 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 C19orf48Q6RUI8 117 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 CYP2R1Q6VVX0 501 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 Q6ZUG5 572 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 APBB1IPQ7Z5R6 666 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 PROSER1Q86XN7 944 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 LILRB2Q8N423 598 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 FBXL16Q8N461 479 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 ZSWIM2Q8NEG5 633 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 DEFB124Q8NES8 71 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 BPIFB1Q8TDL5 484 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 KCTD13Q8WZ19 329 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 HAS1Q92839 578 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 EXOC4Q96A65 974 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 ZFYVE19Q96K21 471 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 CCDC43Q96MW1 224 aaKnown RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 CDC6Q99741 560 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 PLCD4Q9BRC7 762 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 XYLT2Q9H1B5 865 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 POLR3FQ9H1D9 316 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-239ENST00000556315 PDZD7Q9H5P4 517 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 ARHGEF4Q9NR80 690 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 AP5S1Q9NUS5 200 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 SLC38A7Q9NVC3 462 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 SIRT5Q9NXA8 310 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 GDAQ9Y2T3 454 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 ASB3Q9Y575 518 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 NUB1Q9Y5A7 615 aa5.26□□□□□ -1.57
ATXN3-239ENST00000556315 CCDC194A0A1B0GVG4 234 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 FADS2P1A8MWK0 482 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 PODXLO00592 558 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 FGF10O15520 208 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-239ENST00000556315 TBX1O43435 398 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 CCNT1O60563 726 aaKnown RBP5.25□□□□□ -1.57
ATXN3-239ENST00000556315 OAZ2O95190 189 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 DEXIO95424 95 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 APBB3O95704 486 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 CAPNS1P04632 268 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 SCG5P05408 212 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 PRKCBP05771 671 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 FAM153BP0C7A2 387 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 RARRES1P49788 294 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 GFRA1P56159 465 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 IRX4P78413 519 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 SIM1P81133 766 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-239ENST00000556315 MAP4K2Q12851 820 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 LMAN2Q12907 356 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 RUNX3Q13761 415 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 GLRA4Q5JXX5 417 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 CDCA2Q69YH5 1023 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-239ENST00000556315 FSTL4Q6MZW2 842 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 PKN3Q6P5Z2 889 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 ALKAL1Q6UXT8 129 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 ZPBP2Q6X784 338 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms