RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 SYNJ2BP-COX16A0A087WUM0 186 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 NRG2O14511 850 aaPredicted RBP10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 MDM4O15151 490 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 SPOPO43791 374 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 PRPSAP2O60256 369 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 LRCH4O75427 683 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 IGLV3-27P01718 113 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 TUBB4AP04350 444 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 CKMP06732 381 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 KCNA5P22460 613 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 MIPP30301 263 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 CCR1P32246 355 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 AIF1P55008 147 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 NME3Q13232 169 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 SMAD4Q13485 552 aaKnown RBP10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 HADHQ16836 314 aaKnown RBP10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 ARL13BQ3SXY8 428 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 STXBP5Q5T5C0 1151 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 NUGGCQ68CJ6 796 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 PEX26Q7Z412 305 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 DDX42Q86XP3 938 aaKnown RBP eCLIP10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 MIB1Q86YT6 1006 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 PSTKQ8IV42 348 aaKnown RBP10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 UNC45BQ8IWX7 931 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 C17orf53Q8N3J3 647 aaPredicted RBP10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 PPM1EQ8WY54 764 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 ING5Q8WYH8 240 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 FGF13Q92913 245 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 RNF34Q969K3 372 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 PLD4Q96BZ4 506 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 SLC39A13Q96H72 371 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 SLC22A12Q96S37 553 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 KLF16Q9BXK1 252 aaPredicted RBP10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 IRX2Q9BZI1 471 aaPredicted RBP10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 WDCPQ9H6R7 721 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 PIGVQ9NUD9 493 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 COX16Q9P0S2 106 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 CALCOCO1Q9P1Z2 691 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 SLC12A6Q9UHW9 1150 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 AMFRQ9UKV5 643 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 CDH7Q9ULB5 785 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 USP18Q9UMW8 372 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 USTQ9Y2C2 406 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 CPQQ9Y646 472 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 CAPN6Q9Y6Q1 641 aa10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 ZNF638Q14966 1978 aaKnown RBP10.44□□□□□ -0.74
MTHFD1-213ENST00000556284 KCNU1A8MYU2 1149 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 MIF4GDA9UHW6 222 aaKnown RBP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 H3BQ06 376 aaPredicted RBP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 MSI1O43347 362 aaKnown RBP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 ADH1BP00325 375 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 APOEP02649 317 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 KRT7P08729 469 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 TCF3P15923 654 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 ADRA1BP35368 520 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 SSR1P43307 286 aaKnown RBP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 CBX2Q14781 532 aaPredicted RBP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 CLUL1Q15846 466 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 LEXMQ3ZCV2 418 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 ZC3H12AQ5D1E8 599 aaKnown RBP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 ZNF569Q5MCW4 686 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 ERMARDQ5T6L9 678 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 ACBD5Q5T8D3 534 aaPredicted RBP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 SCYL2Q6P3W7 929 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 GET4Q7L5D6 327 aaPredicted RBP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 OTOP3Q7RTS5 596 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 POLNQ7Z5Q5 900 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 NT5DC3Q86UY8 548 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 FAM131BQ86XD5 332 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 ARID3BQ8IVW6 561 aaPredicted RBP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 NPAS3Q8IXF0 933 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 RHOT1Q8IXI2 618 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 KIAA1958Q8N8K9 716 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 TEKT4Q8WW24 435 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 SMARCD2Q92925 531 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 AZIN2Q96A70 460 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 NTAN1Q96AB6 310 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 FCRL2Q96LA5 508 aaPredicted RBP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 ZSWIM3Q96MP5 696 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 DCLK3Q9C098 648 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 POMKQ9H5K3 350 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 KIF9Q9HAQ2 790 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 TRPV4Q9HBA0 871 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 GKN1Q9NS71 199 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 TDP1Q9NUW8 608 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 ARHGEF38Q9NXL2 777 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 PCSK1NQ9UHG2 260 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 CDH22Q9UJ99 828 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 JRKLQ9Y4A0 524 aa10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 USP15Q9Y4E8 981 aaPredicted RBP10.43□□□□□ -0.74
MTHFD1-213ENST00000556284 CFAP99D6REC4 459 aa10.42□□□□□ -0.74
MTHFD1-213ENST00000556284 KIF2AO00139 706 aaPredicted RBP10.42□□□□□ -0.74
MTHFD1-213ENST00000556284 MBTPS2O43462 519 aa10.42□□□□□ -0.74
MTHFD1-213ENST00000556284 PSTPIP1O43586 416 aa10.42□□□□□ -0.74
MTHFD1-213ENST00000556284 STC2O76061 302 aa10.42□□□□□ -0.74
MTHFD1-213ENST00000556284 LATS1O95835 1130 aa10.42□□□□□ -0.74
MTHFD1-213ENST00000556284 FTCDO95954 541 aa10.42□□□□□ -0.74
MTHFD1-213ENST00000556284 CTNNA2P26232 953 aa10.42□□□□□ -0.74
MTHFD1-213ENST00000556284 CTNNA1P35221 906 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms