RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 TRIM71Q2Q1W2 868 aaKnown RBP7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SV2CQ496J9 727 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SGO2Q562F6 1265 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 XKR4Q5GH76 650 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 PEAR1Q5VY43 1037 aaPredicted RBP7.15□□□□□ -1.26
SLIRP-204ENST00000555890 C9orf57Q5W0N0 161 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SCARA3Q6AZY7 606 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 PLEKHA7Q6IQ23 1121 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 DNAJC24Q6P3W2 148 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 FBXL19Q6PCT2 694 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 DCUN1D2Q6PH85 259 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 CCNI2Q6ZMN8 369 aaPredicted RBP7.15□□□□□ -1.26
SLIRP-204ENST00000555890 PRICKLE2Q7Z3G6 844 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 MAATS1Q7Z4T9 603 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SERINC5Q86VE9 423 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 FAM228AQ86W67 206 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 UNC93AQ86WB7 457 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 CYP4X1Q8N118 509 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 LINC00528Q8N1L1 170 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 FAM181AQ8N9Y4 354 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 PHC3Q8NDX5 983 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 RNF217Q8TC41 542 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 MAIP1Q8WWC4 291 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 TFAP2BQ92481 460 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 KRT12Q99456 494 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 CEP44Q9C0F1 390 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SDCBP2Q9H190 292 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 NXF3Q9H4D5 531 aaKnown RBP7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SLITRK6Q9H5Y7 841 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 IGFLR1Q9H665 355 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SMYD3Q9H7B4 428 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SYNCQ9H7C4 482 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 BRD7Q9NPI1 651 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 LATS2Q9NRM7 1088 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SLC38A7Q9NVC3 462 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SMARCAL1Q9NZC9 954 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 EHD2Q9NZN4 543 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 OGFRQ9NZT2 677 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 IP6K2Q9UHH9 426 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 ST3GAL5Q9UNP4 418 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 HES2Q9Y543 173 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 IPPQ9Y573 584 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 INSL6Q9Y581 213 aa7.15□□□□□ -1.26
SLIRP-204ENST00000555890 SCN1AP35498 2009 aa7.15□□□□□ -1.27
SLIRP-204ENST00000555890 PIRO00625 290 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 GRM6O15303 877 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 GREM1O60565 184 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 HUS1O60921 280 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 CAND2O75155 1236 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 ZRANB2O95218 330 aaKnown RBP eCLIP7.14□□□□□ -1.27
SLIRP-204ENST00000555890 RETP07949 1114 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 FAM163BP0C2L3 166 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 SETSIPP0DME0 302 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 SELPP16109 830 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 AKAP5P24588 427 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 MAN1A1P33908 653 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 THPOP40225 353 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 SSR1P43307 286 aaKnown RBP7.14□□□□□ -1.27
SLIRP-204ENST00000555890 TAF6P49848 677 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 PEX5P50542 639 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 RAB27AP51159 221 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 NDST1P52848 882 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 VSNL1P62760 191 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 PTP4A2Q12974 167 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 GPS2Q13227 327 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 BFSP2Q13515 415 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 PIGHQ14442 188 aaPredicted RBP7.14□□□□□ -1.27
SLIRP-204ENST00000555890 ZNF268Q14587 947 aaPredicted RBP7.14□□□□□ -1.27
SLIRP-204ENST00000555890 FBXO47Q5MNV8 452 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 SAMD5Q5TGI4 173 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 DENND1BQ6P3S1 775 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 PHLDB2Q86SQ0 1253 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 RHOT1Q8IXI2 618 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 KLHL7Q8IXQ5 586 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 SLC4A11Q8NBS3 891 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 SMG8Q8ND04 991 aaKnown RBP7.14□□□□□ -1.27
SLIRP-204ENST00000555890 C1orf131Q8NDD1 294 aaKnown RBP7.14□□□□□ -1.27
SLIRP-204ENST00000555890 OR13H1Q8NG92 308 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 IPO4Q8TEX9 1081 aaKnown RBP7.14□□□□□ -1.27
SLIRP-204ENST00000555890 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.14□□□□□ -1.27
SLIRP-204ENST00000555890 CD101Q93033 1021 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 WNT8BQ93098 351 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 C18orf8Q96DM3 657 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 BTBD6Q96KE9 485 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 ZMAT2Q96NC0 199 aaKnown RBP7.14□□□□□ -1.27
SLIRP-204ENST00000555890 RUNDC3BQ96NL0 473 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 ELOVL4Q9GZR5 314 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 CRISPLD1Q9H336 500 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 SNX25Q9H3E2 840 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 LIN7BQ9HAP6 207 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 GMPR2Q9P2T1 348 aaKnown RBP7.14□□□□□ -1.27
SLIRP-204ENST00000555890 TUBGCP4Q9UGJ1 667 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 CHORDC1Q9UHD1 332 aaPredicted RBP7.14□□□□□ -1.27
SLIRP-204ENST00000555890 TMEM59LQ9UK28 342 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 RAB23Q9ULC3 237 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 SNX9Q9Y5X1 595 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 SQORQ9Y6N5 450 aa7.14□□□□□ -1.27
SLIRP-204ENST00000555890 TMEM191CA6NGB0 347 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 A8MXQ7 604 aa7.13□□□□□ -1.27
SLIRP-204ENST00000555890 KPNA7A9QM74 516 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms