RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 FAM161BQ96MY7 647 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 OLFM3Q96PB7 478 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 CSPG4P5Q96PW8 444 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 NR1H4Q96RI1 486 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-209ENST00000555609 TSPAN18Q96SJ8 248 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 DHX35Q9H5Z1 703 aaKnown RBP16.68■□□□□ 0.26
TUBB3-209ENST00000555609 ARMCX1Q9P291 453 aa16.68■□□□□ 0.26
TUBB3-209ENST00000555609 H3BRJ5 948 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 PIK3R2O00459 728 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 LINGO3P0C6S8 592 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 PGAM1P18669 254 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 ARL4AP40617 200 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 IREB2P48200 963 aaKnown RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 BCAT1P54687 386 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 CDC42EP1Q00587 391 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 ARHGAP1Q07960 439 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 SLC10A2Q12908 348 aaPredicted RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 FRG1Q14331 258 aaKnown RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 PCBP1Q15365 356 aaKnown RBP eCLIP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 FASTKD1Q53R41 847 aaKnown RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 TRMT10BQ6PF06 316 aaKnown RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 ACOT1Q86TX2 421 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 ERO1BQ86YB8 467 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 SCUBE3Q8IX30 993 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 GPC2Q8N158 579 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 BEST2Q8NFU1 509 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 PIWIL2Q8TC59 973 aaKnown RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 COPS5Q92905 334 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 MRPL45Q9BRJ2 306 aaKnown RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 CCDC28BQ9BUN5 200 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 MTMR10Q9NXD2 777 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 DDX43Q9NXZ2 648 aaKnown RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 SCOCQ9UIL1 159 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 UGT1A9O60656 530 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 SERPINE1P05121 402 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 CALRP27797 417 aaKnown RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 GARSP41250 739 aaKnown RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 PSEN1P49768 467 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 IGBP1P78318 339 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 GBE1Q04446 702 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 PRKG1Q13976 671 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 EFHC1Q5JVL4 640 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 MBLAC2Q68D91 279 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 MTHFD1LQ6UB35 978 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 CRYBG2Q8N1P7 616 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 PPTC7Q8NI37 304 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 NRG4Q8WWG1 115 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 RILPQ96NA2 401 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 KCTD15Q96SI1 283 aaPredicted RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 ZNF184Q99676 751 aaPredicted RBP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 UGT1A7Q9HAW7 530 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 UGT1A10Q9HAW8 530 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 UGT1A8Q9HAW9 530 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 DNAJC28Q9NX36 388 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.67■□□□□ 0.26
TUBB3-209ENST00000555609 DTLQ9NZJ0 730 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 RBPJLQ9UBG7 517 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 ADAM28Q9UKQ2 775 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 SOX13Q9UN79 622 aa16.67■□□□□ 0.26
TUBB3-209ENST00000555609 DPPA5A6NC42 116 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 MAGEA13PA6NCF6 341 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 C2orf71A6NGG8 1288 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 CYB561D2O14569 222 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 GLUD2P49448 558 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 CDK7P50613 346 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 ZBTB6Q15916 424 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 NCBP2-AS2Q69YL0 99 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 TMEM154Q6P9G4 183 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 PACS1Q6VY07 963 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 ULK2Q8IYT8 1036 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 MPP5Q8N3R9 675 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 PPP4R1Q8TF05 950 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 NLRP7Q8WX94 980 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 KCNH4Q9UQ05 1017 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 APOBEC2Q9Y235 224 aaKnown RBP16.66■□□□□ 0.26
TUBB3-209ENST00000555609 SNX9Q9Y5X1 595 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 USP3Q9Y6I4 520 aa16.66■□□□□ 0.26
TUBB3-209ENST00000555609 RBM47A0AV96 593 aaKnown RBP16.65■□□□□ 0.26
TUBB3-209ENST00000555609 KIF3CO14782 793 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 PLIN3O60664 434 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 ALOX15P16050 662 aaPredicted RBP16.65■□□□□ 0.26
TUBB3-209ENST00000555609 YY1P25490 414 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 SESN3P58005 492 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 CES4AQ5XG92 561 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 VTA1Q9NP79 307 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 RAD54BQ9Y620 910 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 PAPPA2Q9BXP8 1791 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 PLXNA1Q9UIW2 1896 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 UNCXA6NJT0 531 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 GABBR2O75899 941 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 GSRP00390 522 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 FGF3P11487 239 aaPredicted RBP16.65■□□□□ 0.26
TUBB3-209ENST00000555609 ANPEPP15144 967 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 PRDX6P30041 224 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 SLC1A6P48664 564 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 MXRA7P84157 204 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 PDK1Q15118 436 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 CCDC153Q494R4 210 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 SPANXN3Q5MJ09 141 aa16.65■□□□□ 0.26
TUBB3-209ENST00000555609 TEDDM1Q5T9Z0 273 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms