RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ELSPBP1Q96BH3 223 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 C18orf8Q96DM3 657 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 SYT11Q9BT88 431 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 RBM12Q9NTZ6 932 aaKnown RBP10.28□□□□□ -0.76
PSEN1-213ENST00000555386 TAS2R14Q9NYV8 317 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 COX16Q9P0S2 106 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 IGSF9Q9P2J2 1179 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 DNMT3LQ9UJW3 386 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 TMEM59LQ9UK28 342 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 NAALADL1Q9UQQ1 740 aa10.28□□□□□ -0.76
PSEN1-213ENST00000555386 F5P12259 2224 aa10.27□□□□□ -0.76
PSEN1-213ENST00000555386 SLC12A8A0AV02 714 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 MSI1O43347 362 aaKnown RBP10.27□□□□□ -0.77
PSEN1-213ENST00000555386 ECI2O75521 394 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 FTCDO95954 541 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 PSMC3P17980 439 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 CXCR5P32302 372 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 NOP2P46087 812 aaKnown RBP10.27□□□□□ -0.77
PSEN1-213ENST00000555386 SNX16P57768 344 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 ZXDBP98169 803 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 TCEAL1Q15170 157 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 FAM102AQ5T9C2 384 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-213ENST00000555386 ALS2CLQ60I27 953 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 TRIM68Q6AZZ1 485 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 TRIM72Q6ZMU5 477 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 MFSD6LQ8IWD5 586 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 GOLGA6L1Q8N7Z2 621 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 BPIFB1Q8TDL5 484 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 WBP2Q969T9 261 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 TRMT61BQ9BVS5 477 aaKnown RBP10.27□□□□□ -0.77
PSEN1-213ENST00000555386 BRD9Q9H8M2 597 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 GDF3Q9NR23 364 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 ADAM22Q9P0K1 906 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 MARCH2Q9P0N8 246 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 VPS18Q9P253 973 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 DMGDHQ9UI17 866 aaKnown RBP10.27□□□□□ -0.77
PSEN1-213ENST00000555386 FBXL21Q9UKT6 434 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 CA14Q9ULX7 337 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 SORCS3Q9UPU3 1222 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 SH3BP1Q9Y3L3 701 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 WNT6Q9Y6F9 365 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 MIA3Q5JRA6 1907 aa10.27□□□□□ -0.77
PSEN1-213ENST00000555386 CCDC188H7C350 402 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 ATMINO43313 823 aaPredicted RBP10.26□□□□□ -0.77
PSEN1-213ENST00000555386 CYP1A1P04798 512 aaPredicted RBP10.26□□□□□ -0.77
PSEN1-213ENST00000555386 MYBL2P10244 700 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 CDH5P33151 784 aaPredicted RBP10.26□□□□□ -0.77
PSEN1-213ENST00000555386 HADHBP55084 474 aaKnown RBP10.26□□□□□ -0.77
PSEN1-213ENST00000555386 SLC6A3Q01959 620 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 TNK2Q07912 1038 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 DCAF6Q58WW2 860 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 PPP1R15BQ5SWA1 713 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 SNX30Q5VWJ9 437 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 SYPL2Q5VXT5 272 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 TADA2BQ86TJ2 420 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 XYLT1Q86Y38 959 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 RASGEF1CQ8N431 466 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 OLIG1Q8TAK6 271 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 RFFLQ8WZ73 363 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 IRGQQ8WZA9 623 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 ASIC4Q96FT7 647 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 PKNOX2Q96KN3 472 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 PSMB7Q99436 277 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 TRPV4Q9HBA0 871 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 CYLDQ9NQC7 956 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 ABCC13Q9NSE7 274 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 THG1LQ9NWX6 298 aaKnown RBP10.26□□□□□ -0.77
PSEN1-213ENST00000555386 DUS2Q9NX74 493 aaKnown RBP10.26□□□□□ -0.77
PSEN1-213ENST00000555386 CLIC5Q9NZA1 410 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 ZMYM5Q9UJ78 669 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 STRIP2Q9ULQ0 834 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 TTC7AQ9ULT0 858 aaPredicted RBP10.26□□□□□ -0.77
PSEN1-213ENST00000555386 ARHGAP26Q9UNA1 814 aa10.26□□□□□ -0.77
PSEN1-213ENST00000555386 ANKRD62A6NC57 917 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 GOLGA6BA6NDN3 693 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 TNFRSF10AO00220 468 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 PGRMC1O00264 195 aaKnown RBP10.25□□□□□ -0.77
PSEN1-213ENST00000555386 KCNK3O14649 394 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 SART1O43290 800 aaKnown RBP10.25□□□□□ -0.77
PSEN1-213ENST00000555386 DCXO43602 365 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 OPA1O60313 960 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 SYF2O95926 243 aaKnown RBP10.25□□□□□ -0.77
PSEN1-213ENST00000555386 FYNP06241 537 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 UNGP13051 313 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-213ENST00000555386 ARSAP15289 507 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 ABCB4P21439 1286 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 MMP8P22894 467 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 IFNAR2P48551 515 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 RPL34P49207 117 aaKnown RBP10.25□□□□□ -0.77
PSEN1-213ENST00000555386 TUBP50607 506 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 GALCP54803 685 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 YWHAZP63104 245 aaKnown RBP10.25□□□□□ -0.77
PSEN1-213ENST00000555386 PITX1P78337 314 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-213ENST00000555386 SLC7A9P82251 487 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 ZNF77Q15935 545 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 PPP2R5EQ16537 467 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 EFHC1Q5JVL4 640 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 ACAD10Q6JQN1 1059 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 OLFML1Q6UWY5 402 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 PEX26Q7Z412 305 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms