RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 DNAJC28Q9NX36 388 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 CDH22Q9UJ99 828 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 ADAMTS6Q9UKP5 1117 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 PSMD13Q9UNM6 376 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 ZNF510Q9Y2H8 683 aa11.04□□□□□ -0.64
MTHFD1-210ENST00000555252 MCF2LO15068 1137 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 CNMDO75829 334 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 ARIH2O95376 493 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 ALOX15P16050 662 aaPredicted RBP11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 KDELR1P24390 212 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 RFC1P35251 1148 aaPredicted RBP11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 GABRB2P47870 512 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 ALDH18A1P54886 795 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 MRPS5P82675 430 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 MBTD1Q05BQ5 628 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 TBL3Q12788 808 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 DLG1Q12959 904 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 TUBB3Q13509 450 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 KCTD2Q14681 263 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 HSDL1Q3SXM5 330 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 PTPN20Q4JDL3 420 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 CYP4A22Q5TCH4 519 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 C4orf22Q6V702 233 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 SCARA5Q6ZMJ2 495 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 KBTBD6Q86V97 674 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 ERO1BQ86YB8 467 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 IFNLR1Q8IU57 520 aaPredicted RBP11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 SLC26A7Q8TE54 656 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 MROH8Q9H579 483 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 ASB7Q9H672 318 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 USP29Q9HBJ7 922 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 XAB2Q9HCS7 855 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 NXF1Q9UBU9 619 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 KIAA1257Q9ULG3 409 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 APOBEC2Q9Y235 224 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 DTNAQ9Y4J8 743 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 TTLL3Q9Y4R7 772 aa11.03□□□□□ -0.64
MTHFD1-210ENST00000555252 DNAJC25-GNG10A0A024R161 153 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 CST8O60676 142 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 LRCH4O75427 683 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 RFPL1O75677 317 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 HMGCRP04035 888 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 TFAP2AP05549 437 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 C6orf222P0C671 652 aaPredicted RBP11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 VDRP11473 427 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 OSBPP22059 807 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 PEX2P28328 305 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 INHBCP55103 352 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 GDF10P55107 478 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 RAB15P59190 212 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 YWHAGP61981 247 aaKnown RBP eCLIP11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 GAD2Q05329 585 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 DCTN2Q13561 401 aaKnown RBP11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 TTLL4Q14679 1199 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 TRIP10Q15642 601 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 SCARA3Q6AZY7 606 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 EFCAB12Q6NXP0 572 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 ZFP1Q6P2D0 407 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 RNF111Q6ZNA4 994 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 EEPD1Q7L9B9 569 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 TMC7Q7Z402 723 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 CROCCP3Q8IVE0 287 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 ACMSDQ8TDX5 336 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 TRPC4APQ8TEL6 797 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 PYDC1Q8WXC3 89 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 DCPSQ96C86 337 aaKnown RBP11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 NMD3Q96D46 503 aaKnown RBP11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 MCRS1Q96EZ8 462 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 MMP19Q99542 508 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 ASNSD1Q9NWL6 643 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 CLIC5Q9NZA1 410 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 POMPQ9Y244 141 aa11.02□□□□□ -0.64
MTHFD1-210ENST00000555252 A0A0J9YVX5 310 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 TCRBV7S3A2A0A539 114 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 ASB14A6NK59 587 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 HNRNPRO43390 633 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 STAU1O95793 577 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 KRT19P08727 400 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 SPATA31D3P0C874 917 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 CCDC130P13994 396 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 MAGEA6P43360 314 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 BASP1P80723 227 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 PTPN11Q06124 597 aaPredicted RBP11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 RARS2Q5T160 578 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 LPCAT4Q643R3 524 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 EEF1DP3Q658K8 133 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 TXNRD3NBQ6F5E7 133 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 KLHDC10Q6PID8 442 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 RBM44Q6ZP01 1051 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 CDHR3Q6ZTQ4 885 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 SPATA31D4Q6ZUB0 917 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 CYS1Q717R9 158 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 XYLT1Q86Y38 959 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 NT5DC4Q86YG4 428 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 NUP93Q8N1F7 819 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 FBXW8Q8N3Y1 598 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 CMASQ8NFW8 434 aaPredicted RBP11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 TMEM176AQ96HP8 235 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 RSAD1Q9HA92 442 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 ERAP1Q9NZ08 941 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms