RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 MCEMP1Q8IX19 187 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 TNKS2Q9H2K2 1166 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PLEKHG1Q9ULL1 1385 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 WDR19Q8NEZ3 1342 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 TCHHQ07283 1943 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 EFCAB10A6NFE3 127 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 VTNP04004 478 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 AKT2P31751 481 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 TAB1Q15750 504 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 SEL1L3Q68CR1 1132 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 RIPOR1Q6ZS17 1223 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF621Q6ZSS3 439 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 SETD6Q8TBK2 473 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 TMEM159Q96B96 161 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 DHRS1Q96LJ7 313 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 REEP2Q9BRK0 252 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 WBP11Q9Y2W2 641 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 SCAMP3O14828 347 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 GRIN3BO60391 1043 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 FDFT1P37268 417 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 GTF2A2P52657 109 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PRKAG1P54619 331 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 DLG1Q12959 904 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 CBWD6Q4V339 395 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 LRRC1Q9BTT6 524 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 CD209Q9NNX6 404 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 H3BMM5 538 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 XYLBO75191 536 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ACO1P21399 889 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 IFNGR2P38484 337 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 GPR15P49685 360 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PPM1LQ5SGD2 360 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 SAPCD2Q86UD0 394 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 WDR60Q8WVS4 1066 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 QKIQ96PU8 341 aaKnown RBP eCLIP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ATXN3LQ9H3M9 355 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 TNFRSF21O75509 655 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 RGS20O76081 388 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 TGFBR2P37173 567 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 FAM98BQ52LJ0 330 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ZC2HC1CQ53FD0 456 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PODNQ7Z5L7 613 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 MTMR12Q9C0I1 747 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 EHD3Q9NZN3 535 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ZNRF3Q9ULT6 936 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 MINPP1Q9UNW1 487 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 KDM6AO15550 1401 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 DCLK1O15075 740 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 HOXA2O43364 376 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 TPD52L2O43399 206 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 SCN2BO60939 215 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 AVILO75366 819 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ZCCHC18P0CG32 403 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PTPN3P26045 913 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF846Q147U1 533 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 SUZ12Q15022 739 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PTAR1Q7Z6K3 402 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ARMC8Q8IUR7 673 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 OR52L1Q8NGH7 329 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 CBWD1Q9BRT8 395 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 DCP1AQ9NPI6 582 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 LIMD1Q9UGP4 676 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 STK36Q9NRP7 1315 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 A0A088AWK7 358 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 GSAPA4D1B5 854 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 LIN7AO14910 233 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 TOP3BO95985 862 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF10P21506 573 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PFKPQ01813 784 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PYDC2Q56P42 97 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 OR5T3Q8NGG3 340 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 GRIP2Q9C0E4 1043 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 AAR2Q9Y312 384 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 HEG1Q9ULI3 1381 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PVALEFA0A1B0GWK0 134 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 GPR182O15218 404 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ADSLP30566 484 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 KCNJ1P48048 391 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 KLK7P49862 253 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 USP11P51784 963 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ZNHIT3Q15649 155 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 EIF2S3LQ2VIR3 472 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 XKR3Q5GH77 459 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 OR10G6Q8NH81 332 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PGLYRP2Q96PD5 576 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 TMEM79Q9BSE2 394 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 DSEQ9UL01 958 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 LOC102724159A0A0B4J2E5 919 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 CES2O00748 559 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 SPAG6O75602 509 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 GIMD1P0DJR0 217 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PRG2P13727 222 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 STARP49675 285 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 HK2P52789 917 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PWP2Q15269 919 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 OTUD3Q5T2D3 398 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ARID3BQ8IVW6 561 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ZC3H7AQ8IWR0 971 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF473Q8WTR7 871 aaKnown RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 GTF3C2Q8WUA4 911 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms