RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 ZNF699Q32M78 642 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 TAF1BQ53T94 588 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-207ENST00000554927 CEP135Q66GS9 1140 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 SERPINA13PQ6UXR4 307 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 SCARA5Q6ZMJ2 495 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 ANKS1BQ7Z6G8 1248 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 PARD3BQ8TEW8 1205 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 ZNF516Q92618 1163 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 JAKMIP2Q96AA8 810 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 ARID3AQ99856 593 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 DNAI2Q9GZS0 605 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 LHX5Q9H2C1 402 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 SMYD3Q9H7B4 428 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 NUDT5Q9UKK9 219 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 SLC27A6Q9Y2P4 619 aa13.9□□□□□ -0.18
TUBB3-207ENST00000554927 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.9□□□□□ -0.18
TUBB3-207ENST00000554927 GOLGA6L4A6NEF3 574 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 CAPN8A6NHC0 703 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 ENC1O14682 589 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 KLRC4O43908 158 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 LDOC1O95751 146 aaPredicted RBP13.89□□□□□ -0.19
TUBB3-207ENST00000554927 NR3C1P04150 777 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 CCDC130P13994 396 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 ACO1P21399 889 aaKnown RBP13.89□□□□□ -0.19
TUBB3-207ENST00000554927 RPL13P26373 211 aaKnown RBP13.89□□□□□ -0.19
TUBB3-207ENST00000554927 ACSL1P33121 698 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 PLA2G4AP47712 749 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 CXADRP78310 365 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 TARDBPQ13148 414 aaKnown RBP eCLIP13.89□□□□□ -0.19
TUBB3-207ENST00000554927 C10orf120Q5SQS8 335 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 PAQR9Q6ZVX9 377 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 ACOT1Q86TX2 421 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 GATAD2AQ86YP4 633 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 TMC2Q8TDI7 906 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 TMEM174Q8WUU8 243 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 SORCS1Q8WY21 1168 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 TAF4BQ92750 862 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 SMOQ99835 787 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 IMPG2Q9BZV3 1241 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 CYLDQ9NQC7 956 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 DMAC2Q9NW81 257 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 ELOVL2Q9NXB9 296 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 DNMT3LQ9UJW3 386 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 FBXO10Q9UK96 956 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 HPSEQ9Y251 543 aa13.89□□□□□ -0.19
TUBB3-207ENST00000554927 A0A1W2PQ27 194 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 A0A1W2PQ64 194 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 LRRIQ3A6PVS8 624 aaPredicted RBP13.88□□□□□ -0.19
TUBB3-207ENST00000554927 CBX4O00257 560 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 IKBKBO14920 756 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 CYP26A1O43174 497 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 DFNA5O60443 496 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 RFPL3O75679 317 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 BEST1O76090 585 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 SEMA4FO95754 770 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 CYBBP04839 570 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 HMBSP08397 361 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 RARGP13631 454 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 KRT13P13646 458 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 CASP4P49662 377 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 NDUFA8P51970 172 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 BCAT1P54687 386 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 CCDC173Q0VFZ6 552 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 DNAJC3Q13217 504 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 ENPP2Q13822 863 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 KCNT1Q5JUK3 1230 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 Q6ZNB5 142 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 FUKQ8N0W3 1084 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 KIAA0895Q8NCT3 520 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 CCDC150Q8NCX0 1101 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 OR2T3Q8NH03 318 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 SLC2A14Q8TDB8 520 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 BIRC7Q96CA5 298 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 CNDP2Q96KP4 475 aaKnown RBP13.88□□□□□ -0.19
TUBB3-207ENST00000554927 BTBD1Q9H0C5 482 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 XYLT2Q9H1B5 865 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 VRTNQ9H8Y1 702 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 OSGEPQ9NPF4 335 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 OSER1Q9NX31 292 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 PCDHGA1Q9Y5H4 931 aa13.88□□□□□ -0.19
TUBB3-207ENST00000554927 KNL1Q8NG31 2342 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 A0A1W2PQH9 124 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 STC2O76061 302 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 RHOBTB3O94955 611 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 PENKP01210 267 aaPredicted RBP13.87□□□□□ -0.19
TUBB3-207ENST00000554927 C4BPAP04003 597 aaKnown RBP13.87□□□□□ -0.19
TUBB3-207ENST00000554927 ITGAVP06756 1048 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 CDK4P11802 303 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 ABCB4P21439 1286 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 CD27P26842 260 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 ADORA2BP29275 332 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 CHKAP35790 457 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 CTSKP43235 329 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 CLDN10P78369 228 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
TUBB3-207ENST00000554927 FNDC3BQ53EP0 1204 aaKnown RBP13.87□□□□□ -0.19
TUBB3-207ENST00000554927 HES3Q5TGS1 186 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 FYB2Q5VWT5 728 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 KRBA2Q6ZNG9 492 aa13.87□□□□□ -0.19
TUBB3-207ENST00000554927 TADA2BQ86TJ2 420 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms