RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TAF12Q16514 161 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 P3H1Q32P28 736 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 MMS22LQ6ZRQ5 1243 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 CHSY1Q86X52 802 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 FTSJ3Q8IY81 847 aaKnown RBP3.57□□□□□ -1.84
SCFD1-213ENST00000554776 PNPLA1Q8N8W4 532 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 ABHD5Q8WTS1 349 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 AFG1LQ8WV93 481 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 DDB2Q92466 427 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 EID2BQ96D98 161 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 EDC3Q96F86 508 aaKnown RBP3.57□□□□□ -1.84
SCFD1-213ENST00000554776 KAZALD1Q96I82 304 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 RITA1Q96K30 269 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 RTKNQ9BST9 563 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 BRD8Q9H0E9 1235 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 PRDM16Q9HAZ2 1276 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 PRDM8Q9NQV8 689 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 GAR1Q9NY12 217 aaKnown RBP3.57□□□□□ -1.84
SCFD1-213ENST00000554776 IFT80Q9P2H3 777 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-213ENST00000554776 MGAT4CQ9UBM8 478 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 CA14Q9ULX7 337 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 DAPP1Q9UN19 280 aa3.57□□□□□ -1.84
SCFD1-213ENST00000554776 KIF28PB7ZC32 967 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 POC1B-GALNT4F8VUJ3 575 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 INO80B-WBP1J3KQ70 363 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 NCAM2O15394 837 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 CA12O43570 354 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 CER1O95813 267 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 MBPP02686 304 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-213ENST00000554776 CHRM5P08912 532 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-213ENST00000554776 ATF7P17544 494 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-213ENST00000554776 CD53P19397 219 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 RXRAP19793 462 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 CERS1P27544 350 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 AP2B1P63010 937 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 GPC5P78333 572 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 DNASE1L3Q13609 305 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 KCNJ12Q14500 433 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 TMEM196Q5HYL7 178 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 ANKRD45Q5TZF3 282 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 FAM90A2PQ658T7 463 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 DENND2CQ68D51 928 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 TANGO2Q6ICL3 276 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 CCDC70Q6NSX1 233 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 RFX8Q6ZV50 586 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 C2CD5Q86YS7 1000 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 SLC44A2Q8IWA5 706 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-213ENST00000554776 GALNT4Q8N4A0 578 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 PNLDC1Q8NA58 520 aaKnown RBP3.56□□□□□ -1.84
SCFD1-213ENST00000554776 TRAPPC9Q96Q05 1148 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 ASB2Q96Q27 587 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 MECRQ9BV79 373 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 MAF1Q9H063 256 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 VPS16Q9H269 839 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 TP63Q9H3D4 680 aaPredicted RBP3.56□□□□□ -1.84
SCFD1-213ENST00000554776 ELAC1Q9H777 363 aaKnown RBP3.56□□□□□ -1.84
SCFD1-213ENST00000554776 KIF17Q9P2E2 1029 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 FEM1BQ9UK73 627 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 CRYL1Q9Y2S2 319 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 PCDHB7Q9Y5E2 793 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 TNFRSF18Q9Y5U5 241 aa3.56□□□□□ -1.84
SCFD1-213ENST00000554776 LRRFIP2Q9Y608 721 aaKnown RBP3.56□□□□□ -1.84
SCFD1-213ENST00000554776 DNAJC9-AS1A6NH13 148 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 BTBD19C9JJ37 291 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 H0Y3Z8 333 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 H3BNC9 293 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 M0QYT0 321 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 EYA2O00167 538 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 PRAMEF2O60811 474 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 RPP40O75818 363 aaKnown RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 GLP2RO95838 553 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 MT-CO3P00414 261 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 TUBB4AP04350 444 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 CDK4P11802 303 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 DRD1P21728 446 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 EPHB2P29323 1055 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 ADD2P35612 726 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 ABCG1P45844 678 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 DGKQP52824 942 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 COPB1P53618 953 aaKnown RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 SSBP2P81877 361 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 TXNL4AP83876 142 aaKnown RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 CFHR3Q02985 330 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 LARS2Q15031 903 aaKnown RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 RPS6KA2Q15349 733 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 EZH2Q15910 746 aaKnown RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 TRIM71Q2Q1W2 868 aaKnown RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 ATPAF1Q5TC12 328 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 PIK3AP1Q6ZUJ8 805 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 NRSN1Q8IZ57 195 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 C12orf76Q8N812 135 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 C8orf58Q8NAV2 365 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 MAFAQ8NHW3 353 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 PNISRQ8TF01 805 aaKnown RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 ASB12Q8WXK4 309 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 C3orf49Q96BT1 292 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 PRR11Q96HE9 360 aaPredicted RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 VPS50Q96JG6 964 aa3.55□□□□□ -1.84
SCFD1-213ENST00000554776 FYTTD1Q96QD9 318 aaKnown RBP3.55□□□□□ -1.84
SCFD1-213ENST00000554776 NUDT22Q9BRQ3 303 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms