RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 TMEM52Q8NDY8 209 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 CEP76Q8TAP6 659 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 HNRNPLLQ8WVV9 542 aaKnown RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 CD101Q93033 1021 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 NKD1Q969G9 470 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 C18orf25Q96B23 403 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 CHFRQ96EP1 664 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 LRIG1Q96JA1 1093 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 CNOT6LQ96LI5 555 aaKnown RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 JAKMIP1Q96N16 626 aaKnown RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 SLC6A18Q96N87 628 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 PGLYRP2Q96PD5 576 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 BBC3Q96PG8 261 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 GCNAQ96QF7 691 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 TCHPQ9BT92 498 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 TTC12Q9H892 705 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 PTPRHQ9HD43 1115 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 TUFT1Q9NNX1 390 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 GFOD1Q9NXC2 390 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 TBX20Q9UMR3 447 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 TIMM13Q9Y5L4 95 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 MYH15Q9Y2K3 1946 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 ASPMQ8IZT6 3477 aa5.22□□□□□ -1.57
ATXN3-229ENST00000554672 MYH9P35579 1960 aaKnown RBP5.22□□□□□ -1.57
ATXN3-229ENST00000554672 SDK1Q7Z5N4 2213 aa5.21□□□□□ -1.57
ATXN3-229ENST00000554672 ANKRD11Q6UB99 2663 aaPredicted RBP5.21□□□□□ -1.57
ATXN3-229ENST00000554672 MTCL1Q9Y4B5 1905 aaKnown RBP5.21□□□□□ -1.57
ATXN3-229ENST00000554672 SSU72P8A0A1W2PR75 194 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 MTMR11A4FU01 709 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ARHGEF35A5YM69 484 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 HRKO00198 91 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 PRRG2O14669 202 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 OPHN1O60890 802 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ZNF205O95201 554 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 OR4Q2P0C623 313 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 MCF2P10911 925 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ARSAP15289 507 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 TYMPP19971 482 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 CYP3A5P20815 502 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 BCKDHBP21953 392 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 PAX3P23760 479 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 HSPA4P34932 840 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 HOXD12P35452 270 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 AARSP49588 968 aaKnown RBP eCLIP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ZNF165P49910 485 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ERVFRD-1P60508 538 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 FAM193AP78312 1265 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 CYP4F8P98187 520 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 GFPT1Q06210 699 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 BFSP1Q12934 665 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 SLC14A1Q13336 389 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 AUHQ13825 339 aaKnown RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ZNF268Q14587 947 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 VEPH1Q14D04 833 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 TRIP6Q15654 476 aaKnown RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 DUOXA1Q1HG43 343 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 SLC10A6Q3KNW5 377 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ZNF568Q3ZCX4 644 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 HSF5Q4G112 596 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 LMBRD2Q68DH5 695 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ANO7Q6IWH7 933 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 DSTYKQ6XUX3 929 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 MON1AQ86VX9 555 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 CPA6Q8N4T0 437 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 MAB21L3Q8N8X9 362 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 OLIG1Q8TAK6 271 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 USP33Q8TEY7 942 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ADAMTS14Q8WXS8 1223 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 KIFAP3Q92845 792 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 USP13Q92995 863 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ZNF274Q96GC6 653 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 FCRL2Q96LA5 508 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 AIFM3Q96NN9 605 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ACO2Q99798 780 aaKnown RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 POLR3CQ9BUI4 534 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 KIFC3Q9BVG8 833 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 MRPL4Q9BYD3 311 aaKnown RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 TPSD1Q9BZJ3 242 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 CDT1Q9H211 546 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ECT2Q9H8V3 914 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 KIF9Q9HAQ2 790 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 PLEKHA5Q9HAU0 1116 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 TMEM74BQ9NUR3 256 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 TDP1Q9NUW8 608 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 ERVK13-1Q9NX77 482 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 TNFRSF10DQ9UBN6 386 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 PILRBQ9UKJ0 227 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 GPR55Q9Y2T6 319 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-229ENST00000554672 DOCK6Q96HP0 2047 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 NOTCH4Q99466 2003 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 CEP295Q9C0D2 2601 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 PHLPP2Q6ZVD8 1323 aa5.21□□□□□ -1.58
ATXN3-229ENST00000554672 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.2□□□□□ -1.58
ATXN3-229ENST00000554672 K7EQS6 105 aa5.2□□□□□ -1.58
ATXN3-229ENST00000554672 SHOXO15266 292 aa5.2□□□□□ -1.58
ATXN3-229ENST00000554672 MED24O75448 989 aa5.2□□□□□ -1.58
ATXN3-229ENST00000554672 SOAT2O75908 522 aa5.2□□□□□ -1.58
ATXN3-229ENST00000554672 CDKL5O76039 1030 aa5.2□□□□□ -1.58
ATXN3-229ENST00000554672 LARGE1O95461 756 aa5.2□□□□□ -1.58
ATXN3-229ENST00000554672 SERPINF2P08697 491 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms