RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SLITRK3O94933 977 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 PCDH8O95206 1070 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 LYPLA2O95372 231 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 ITGB1P05556 798 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 OR52Z1P0C646 297 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 DNAJB1P25685 340 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 YWHABP31946 246 aaKnown RBP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 GDF5P43026 501 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 KPNA1P52294 538 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 IL2P60568 153 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 DSG1Q02413 1049 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 CYP4A11Q02928 519 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 HHEXQ03014 270 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 ORC2Q13416 577 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 CAMK1Q14012 370 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 TRIM29Q14134 588 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 EMC2Q15006 297 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 SAFBQ15424 915 aaKnown RBP eCLIP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 PTPROQ16827 1216 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 TCEAL5Q5H9L2 206 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 CLLU1OSQ5K130 101 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 FAM102BQ5T8I3 360 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 LRRC55Q6ZSA7 311 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 SLC24A5Q71RS6 500 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 GAREM2Q75VX8 874 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 ECHDC2Q86YB7 292 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 C1orf210Q8IVY1 113 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 FBXO18Q8NFZ0 1043 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 SPPL3Q8TCT6 385 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 NEK9Q8TD19 979 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 EDAQ92838 391 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 P2RX5Q93086 422 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 TMX3Q96JJ7 454 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 CEP170P1Q96L14 293 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 GPHA2Q96T91 129 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 HSD17B14Q9BPX1 270 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 JPH2Q9BR39 696 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 FDXACB1Q9BRP7 624 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 GCOM2Q9BZD3 368 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 TMEM117Q9H0C3 514 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 FOXP1Q9H334 677 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 NELFAQ9H3P2 528 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 CWH43Q9H720 699 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 ELAC1Q9H777 363 aaKnown RBP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 UBE2ZQ9H832 354 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 ATP6V0A4Q9HBG4 840 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 IFT122Q9HBG6 1241 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 XPNPEP1Q9NQW7 623 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 TMEM161AQ9NX61 479 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 SUCLA2Q9P2R7 463 aaPredicted RBP4.6□□□□□ -1.67
VTI1B-203ENST00000554636 COG5Q9UP83 839 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 SH3BP1Q9Y3L3 701 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 PCDHB7Q9Y5E2 793 aa4.6□□□□□ -1.67
VTI1B-203ENST00000554636 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 A0A0U1RQF3 1178 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 NPIPB8E9PQR5 432 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 MARCH6O60337 910 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 OPHN1O60890 802 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 MED24O75448 989 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 TOX4O94842 621 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 CSPG5O95196 566 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 BAG4O95429 457 aaKnown RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 C1SP09871 688 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 ZSCAN20P17040 1043 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 IBSPP21815 317 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 SFPQP23246 707 aaKnown RBP eCLIP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 GLRA2P23416 452 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 CD40P25942 277 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 U2AF2P26368 475 aaKnown RBP eCLIP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 MCM7P33993 719 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 TRAPPC10P48553 1259 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 RARRES1P49788 294 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 TOB1P50616 345 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 SCNN1BP51168 640 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 POLGP54098 1239 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 BCAR1P56945 870 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 SESN2P58004 480 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 CDC42EP1Q00587 391 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 ADCY1Q08828 1119 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 LAMTOR4Q0VGL1 99 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 HYAL1Q12794 435 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 LEXMQ3ZCV2 418 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 XKR9Q5GH70 373 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 KIAA1841Q6NSI8 718 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 SRGAP1Q7Z6B7 1085 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 ADGRD2Q7Z7M1 963 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 RHPN2Q8IUC4 686 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 PASD1Q8IV76 773 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 TPH2Q8IWU9 490 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 LRRC43Q8N309 656 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 EFHBQ8N7U6 833 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 C4orf32Q8N8J7 132 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 FAM184AQ8NB25 1140 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 COLGALT1Q8NBJ5 622 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 LEO1Q8WVC0 666 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 POF1BQ8WVV4 589 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 PSPC1Q8WXF1 523 aaKnown RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 RABGGTAQ92696 567 aa4.59□□□□□ -1.67
VTI1B-203ENST00000554636 NKD2Q969F2 451 aaPredicted RBP4.59□□□□□ -1.67
VTI1B-203ENST00000554636 TMEM143Q96AN5 459 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms