RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CYP3A4P08684 503 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 FAM86B2P0C5J1 330 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 SPATA31D3P0C874 917 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 MYBP10242 640 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 CD40P25942 277 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 CNR2P34972 360 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 SREBF1P36956 1147 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 FNTBP49356 437 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 GLUD2P49448 558 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 NEK2P51955 445 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 SHC2P98077 582 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 MCL1Q07820 350 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 DBPQ10586 325 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-228ENST00000554592 ACAP1Q15027 740 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 PDCD1Q15116 288 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 EPHA7Q15375 998 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 CSRP2Q16527 193 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 CD276Q5ZPR3 534 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 LAIR1Q6GTX8 287 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 TSSK4Q6SA08 328 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 CASC1Q6TDU7 716 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 PARM1Q6UWI2 310 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 ZNF852Q6ZMS4 543 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 SPATA31D4Q6ZUB0 917 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 MTSS1LQ765P7 747 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 GET4Q7L5D6 327 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-228ENST00000554592 TAS1R1Q7RTX1 841 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 HEATR3Q7Z4Q2 680 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 MRPL10Q7Z7H8 261 aaKnown RBP5.4□□□□□ -1.54
ATXN3-228ENST00000554592 PALB2Q86YC2 1186 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 FANCBQ8NB91 859 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 FGF14Q92915 247 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 FOXRED1Q96CU9 486 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-228ENST00000554592 CLIC6Q96NY7 704 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 ZNF577Q9BSK1 485 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 MYL10Q9BUA6 226 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 HERC2P3Q9BVR0 1158 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 UBN1Q9NPG3 1134 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.4□□□□□ -1.54
ATXN3-228ENST00000554592 SEMA4GQ9NTN9 838 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 TCEAL9Q9UHQ7 104 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 CDH7Q9ULB5 785 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 PCDHB2Q9Y5E7 798 aa5.4□□□□□ -1.54
ATXN3-228ENST00000554592 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.4□□□□□ -1.54
ATXN3-228ENST00000554592 ATG2AQ2TAZ0 1938 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 A0A087WZ62 844 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 SMCO2A6NFE2 343 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 C9orf118A6NHY6 69 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 B4GALT3O60512 393 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 PROS1P07225 676 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 HNRNPA1P09651 372 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 CD72P21854 359 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 AOAHP28039 575 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 LIFRP42702 1097 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 OR1G1P47890 313 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 ADCY7P51828 1080 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 EPHB1P54762 984 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 NAPAP54920 295 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 SCAND1P57086 179 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 ANTXR2P58335 489 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 SETQ01105 290 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 CREMQ03060 361 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 ADCY1Q08828 1119 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 MTAPQ13126 283 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 KLF1Q13351 362 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 USP41Q3LFD5 358 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 PHF19Q5T6S3 580 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 N4BP2L1Q5TBK1 243 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 IL31Q6EBC2 164 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 FRMD7Q6ZUT3 714 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 CATSPER4Q7RTX7 472 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 GRASPQ7Z6J2 395 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 ZNF410Q86VK4 478 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 MB21D2Q8IYB1 491 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 ZZZ3Q8IYH5 903 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 RNF168Q8IYW5 571 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 CNNM3Q8NE01 707 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 ERCC4Q92889 916 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 PGBD1Q96JS3 809 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 GBP4Q96PP9 640 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 FDXACB1Q9BRP7 624 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 COLEC11Q9BWP8 271 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 SSBP3Q9BWW4 388 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 RSAD1Q9HA92 442 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 PRMT8Q9NR22 394 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 DLL4Q9NR61 685 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 FNIP2Q9P278 1114 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 CROTQ9UKG9 612 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 PIN4Q9Y237 131 aaKnown RBP5.39□□□□□ -1.55
ATXN3-228ENST00000554592 CEP250Q9BV73 2442 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 CNTNAP2Q9UHC6 1331 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 CHD8Q9HCK8 2581 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 ZNF292O60281 2723 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 VPS13AQ96RL7 3174 aa5.39□□□□□ -1.55
ATXN3-228ENST00000554592 KMT2BQ9UMN6 2715 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-228ENST00000554592 IGLV3-22A0A075B6J6 115 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 IGKV6-21A0A0C4DH24 114 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 GOLGA6L22H0YM25 854 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 hCG_1984214I3L0E3 225 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 SH2B2O14492 632 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms