RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PIK3C3Q8NEB9 887 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 SUPT20HQ8NEM7 779 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 DEPTORQ8TB45 409 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 SPATA18Q8TC71 538 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 DPF2Q92785 391 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 SH3KBP1Q96B97 665 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 NRBF2Q96F24 287 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 RPGRIP1Q96KN7 1286 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 RBM14Q96PK6 669 aaKnown RBP4.7□□□□□ -1.66
ATXN3-227ENST00000554491 PSKH2Q96QS6 385 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 SERINC2Q96SA4 455 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 SMC6Q96SB8 1091 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 CPPED1Q9BRF8 314 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-227ENST00000554491 OSBPL6Q9BZF3 934 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 ENKD1Q9H0I2 346 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 RIOX1Q9H6W3 641 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 CYP4F11Q9HBI6 524 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 FANCFQ9NPI8 374 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 SH3GLB2Q9NR46 395 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 AATFQ9NY61 560 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATXN3-227ENST00000554491 SLC5A4Q9NY91 659 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 H2AFY2Q9P0M6 372 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-227ENST00000554491 EPS15L1Q9UBC2 864 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 ZNHIT2Q9UHR6 403 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 ATPIF1Q9UII2 106 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 TTC7AQ9ULT0 858 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-227ENST00000554491 SCAF8Q9UPN6 1271 aaKnown RBP4.7□□□□□ -1.66
ATXN3-227ENST00000554491 NIP7Q9Y221 180 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATXN3-227ENST00000554491 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-227ENST00000554491 COL4A3Q01955 1670 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 NCOR1O75376 2440 aa4.7□□□□□ -1.66
ATXN3-227ENST00000554491 EYSQ5T1H1 3165 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 PRUNE2Q8WUY3 3088 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 RTL9Q8NET4 1388 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 CENPVL1A0A0U1RR11 272 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 IQANK1A0A1B0GTG1 560 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 PRSS47A8MTI9 375 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 RASA4BC9J798 803 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 E9PMD0 336 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 UBE2Q2LH0YL09 131 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 PSMD14O00487 310 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 NVLO15381 856 aaKnown RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 RNMTO43148 476 aaKnown RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 ZSCAN12O43309 604 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 LPXNO60711 386 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 GFPT2O94808 682 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 PAHP00439 452 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 UBL4AP11441 157 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 GZMAP12544 262 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 SDSP20132 328 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 FBLP22087 321 aaKnown RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 RPS12P25398 132 aaKnown RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 HSD17B2P37059 387 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 MLH1P40692 756 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 CASRP41180 1078 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 HALP42357 657 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 CENPAP49450 140 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 RARSP54136 660 aaKnown RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 HSD17B7P56937 341 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 GEMIN4P57678 1058 aaKnown RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 NLRP5P59047 1200 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 IFFO1Q0D2I5 559 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 BNIP1Q12981 228 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 MSLNQ13421 630 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 ITGA7Q13683 1181 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 BRD3Q15059 726 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 LRIT3Q3SXY7 679 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 TIGD2Q4W5G0 525 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 PLEKHG4Q58EX7 1191 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 C20orf194Q5TEA3 1177 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 HECTD2Q5U5R9 776 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 TWF2Q6IBS0 349 aaKnown RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 TIGD7Q6NT04 549 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 CATSPER4Q7RTX7 472 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 MAATS1Q7Z4T9 603 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 SESTD1Q86VW0 696 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 PHYKPLQ8IUZ5 450 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 AADATQ8N5Z0 425 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 ZNF713Q8N859 430 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 DYDC1Q8WWB3 177 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 NELL1Q92832 810 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 SKA1Q96BD8 255 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 OPTNQ96CV9 577 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 GIMAP5Q96F15 307 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 C16orf45Q96MC5 204 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 GUCD1Q96NT3 240 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 ANKRD27Q96NW4 1050 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 MTMR9Q96QG7 549 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 PARVBQ9HBI1 364 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 CD93Q9NPY3 652 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 SEPT11Q9NVA2 429 aaKnown RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 OXSMQ9NWU1 459 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 EIF2B4Q9UI10 523 aaKnown RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 ATP11BQ9Y2G3 1177 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 ZNF711Q9Y462 761 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 MRPL42Q9Y6G3 142 aaKnown RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 LAMA2P24043 3122 aaKnown RBP4.69□□□□□ -1.66
ATXN3-227ENST00000554491 MGAMO43451 1857 aa4.69□□□□□ -1.66
ATXN3-227ENST00000554491 CLRN2A0PK11 232 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms