RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 UBR7Q8N806 425 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 PARD3BQ8TEW8 1205 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 APBB2Q92870 758 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 BADQ92934 168 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 TUBGCP2Q9BSJ2 902 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 CCDC94Q9BW85 323 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 APOL6Q9BWW8 343 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 SGPP1Q9BX95 441 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 FTHL17Q9BXU8 183 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 TRIM6Q9C030 488 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 CNTD2Q9H8S5 307 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 RPF1Q9H9Y2 349 aaKnown RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 METTL14Q9HCE5 456 aaKnown RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 PDE11AQ9HCR9 933 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 GCM1Q9NP62 436 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 IL23AQ9NPF7 189 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 TAB2Q9NYJ8 693 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 RBAKQ9NYW8 714 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 ARMCX3Q9UH62 379 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 LIMA1Q9UHB6 759 aaKnown RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 MBD1Q9UIS9 605 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 DSEQ9UL01 958 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 ZMYND8Q9ULU4 1186 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-212ENST00000554486 MAPRE3Q9UPY8 281 aa6.78□□□□□ -1.32
SCFD1-212ENST00000554486 PTPRJQ12913 1337 aa6.77□□□□□ -1.32
SCFD1-212ENST00000554486 LAMA2P24043 3122 aaKnown RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 FNDC1Q4ZHG4 1894 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 LRRIQ3A6PVS8 624 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 LACTBL1A8MY62 500 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 KRT13P13646 458 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 CDK11BP21127 795 aaKnown RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 AKAP5P24588 427 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 RAB27AP51159 221 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 VAMP7P51809 220 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 COPB1P53618 953 aaKnown RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 TPM4P67936 248 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 FPGSQ05932 587 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 ENPEPQ07075 957 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 SPAG1Q07617 926 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 PPP3CAQ08209 521 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 BFSP1Q12934 665 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 PPIGQ13427 754 aaKnown RBP eCLIP6.77□□□□□ -1.332e-8■■■□□ 17
SCFD1-212ENST00000554486 SLC9A5Q14940 896 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 CRY1Q16526 586 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 MAN2A1Q16706 1144 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 XKR4Q5GH76 650 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 SPOCD1Q6ZMY3 1216 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 SLC24A5Q71RS6 500 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 INTS8Q75QN2 995 aaKnown RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 DDX53Q86TM3 631 aaKnown RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 C1QL4Q86Z23 238 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 CREBRFQ8IUR6 639 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 EFCAB13Q8IY85 973 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 RPUSD2Q8IZ73 545 aaKnown RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 LPPQ93052 612 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 SLC35C1Q96A29 364 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 SNX27Q96L92 541 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 SIGLEC10Q96LC7 697 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 ZMAT2Q96NC0 199 aaKnown RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 NAP1L5Q96NT1 182 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 ACAP3Q96P50 834 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 CGRRF1Q99675 332 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 TOPORSQ9NS56 1045 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 C1orf112Q9NSG2 853 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 INTS13Q9NVM9 706 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 MYOTQ9UBF9 498 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 NUDT5Q9UKK9 219 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 SRPK3Q9UPE1 567 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 PCDHB4Q9Y5E5 795 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 IRAK3Q9Y616 596 aa6.77□□□□□ -1.33
SCFD1-212ENST00000554486 TDRD15B5MCY1 1934 aaKnown RBP6.77□□□□□ -1.33
SCFD1-212ENST00000554486 SCN1AP35498 2009 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 ABHD14A-ACY1A0A1B0GW23 586 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 GOLGA6L3A6NEY3 463 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 FAM90A27PA6NNH2 459 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 ZNF891A8MT65 544 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-212ENST00000554486 LGALS16A8MUM7 142 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 ACOT7O00154 380 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 DVL2O14641 736 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 PTGESO14684 152 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 GSTA4O15217 222 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 INPPL1O15357 1258 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 TEX33O43247 280 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 OFD1O75665 1012 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 IL18RAPO95256 599 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 PFKMP08237 780 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 DLATP10515 647 aaKnown RBP6.76□□□□□ -1.33
SCFD1-212ENST00000554486 KCNE1P15382 129 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 KRT15P19012 456 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 IBSPP21815 317 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-212ENST00000554486 PMLP29590 882 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 DEFB103AP81534 67 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 DSG1Q02413 1049 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 TUSC3Q13454 348 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 ZBTB6Q15916 424 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 CBWD6Q4V339 395 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 VWA3BQ502W6 1294 aa6.76□□□□□ -1.33
SCFD1-212ENST00000554486 DCAF17Q5H9S7 520 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-212ENST00000554486 CBWD3Q5JTY5 395 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms