RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 CYBBP04839 570 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 TPM2P07951 284 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 GLI1P08151 1106 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 NCAM1P13591 858 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 HNRNPLP14866 589 aaKnown RBP eCLIP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 UCHL3P15374 230 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 CDH5P33151 784 aaPredicted RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 PXNP49023 591 aaPredicted RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 YWHAZP63104 245 aaKnown RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 SRSF5Q13243 272 aaKnown RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 DRAP1Q14919 205 aaPredicted RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 MPPE1Q53F39 396 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 MPP7Q5T2T1 576 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 ADGRF1Q5T601 910 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 EMC10Q5UCC4 262 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 RNF43Q68DV7 783 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 PRR23BQ6ZRT6 265 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 TOGARAM2Q6ZUX3 1019 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 CACNA2D4Q7Z3S7 1137 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 SLC47A2Q86VL8 602 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 SCUBE3Q8IX30 993 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 WDTC1Q8N5D0 677 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 CCDC33Q8N5R6 958 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 ZNF513Q8N8E2 541 aaPredicted RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 TXNDC5Q8NBS9 432 aaKnown RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 DQX1Q8TE96 717 aaKnown RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 FAM149B1Q96BN6 582 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 SLC39A13Q96H72 371 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 PIWIL1Q96J94 861 aaKnown RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 LOXL4Q96JB6 756 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 ZC3H10Q96K80 434 aaKnown RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 SERPINB11Q96P15 392 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 NOX5Q96PH1 765 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 CPXM1Q96SM3 734 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 GABRG3Q99928 467 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 HINFPQ9BQA5 517 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 LSM14BQ9BX40 385 aaKnown RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 GANQ9H2C0 597 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 POPDC2Q9HBU9 364 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 FANCLQ9NW38 375 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 TAB2Q9NYJ8 693 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 PLK2Q9NYY3 685 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 TMEM63CQ9P1W3 806 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 LIMA1Q9UHB6 759 aaKnown RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 GMEB2Q9UKD1 530 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 HCN2Q9UL51 889 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 TLR6Q9Y2C9 796 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 SPAG17Q6Q759 2223 aa7.84□□□□□ -1.15
LINC00640-201ENST00000554409 TNRC6BQ9UPQ9 1833 aaKnown RBP7.84□□□□□ -1.15
LINC00640-201ENST00000554409 USP34Q70CQ2 3546 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 FAM186AA6NE01 2351 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 LRRC10BA6NIK2 292 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 PRRT4C9JH25 899 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 F8VZ95 297 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 PES1O00541 588 aaKnown RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 NPC1O15118 1278 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 ACSL4O60488 711 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 HSF2BPO75031 334 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 ALDH1A2O94788 518 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 IGLV3-25P01717 112 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 RETP07949 1114 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 PNMA6AP0CW24 399 aaPredicted RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 CYP11B1P15538 503 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 ZNF18P17022 549 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 HOXD9P28356 352 aaPredicted RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 NTSR1P30989 418 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 KRT9P35527 623 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 SLC11A2P49281 568 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 COPB1P53618 953 aaKnown RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 TBX4P57082 545 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 SNX16P57768 344 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 TYRO3Q06418 890 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 EIF4EBP2Q13542 120 aaPredicted RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 ENPP2Q13822 863 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 RAPGEF1Q13905 1077 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 NCAPHQ15003 741 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 EIF4HQ15056 248 aaKnown RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 E2F5Q15329 346 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 FAM133BQ5BKY9 247 aaKnown RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 EFHC1Q5JVL4 640 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 FKBP15Q5T1M5 1219 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 SYPL2Q5VXT5 272 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 EGFLAMQ63HQ2 1017 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 OLFML1Q6UWY5 402 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 CEP68Q76N32 757 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 ANKS1BQ7Z6G8 1248 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 KIAA0907Q7Z7F0 614 aaPredicted RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 TAC4Q86UU9 113 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 C11orf74Q86VG3 221 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 ZDHHC17Q8IUH5 632 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 DCLK2Q8N568 766 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 FAM160A2Q8N612 972 aaPredicted RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 C1orf131Q8NDD1 294 aaKnown RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 ZNF397Q8NF99 534 aaPredicted RBP7.83□□□□□ -1.16
LINC00640-201ENST00000554409 MDGA1Q8NFP4 955 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 OLIG1Q8TAK6 271 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 EPS8L1Q8TE68 723 aa7.83□□□□□ -1.16
LINC00640-201ENST00000554409 DDI1Q8WTU0 396 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms