RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 EMC10Q5UCC4 262 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 ANO7Q6IWH7 933 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 KBTBD6Q86V97 674 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 CREBRFQ8IUR6 639 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 DENND1CQ8IV53 801 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 MDGA1Q8NFP4 955 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 ZNF606Q8WXB4 792 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 EDEM1Q92611 657 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 SLC4A5Q9BY07 1137 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 DUSP15Q9H1R2 295 aaPredicted RBP10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 NDST4Q9H3R1 872 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 NPDC1Q9NQX5 325 aaPredicted RBP10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 SEMA4GQ9NTN9 838 aa10.86□□□□□ -0.67
PTCD2P1-201ENST00000554393 BECN2A8MW95 431 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 TRIM24O15164 1050 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 THAP12O43422 761 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 LETM1O95202 739 aaPredicted RBP10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 CALCAP01258 141 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 HOXB2P14652 356 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 EEF1GP26641 437 aaKnown RBP10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 BYSLQ13895 437 aaKnown RBP10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 EIF4HQ15056 248 aaKnown RBP10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 VWA3BQ502W6 1294 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 MPPE1Q53F39 396 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 MIIPQ5JXC2 388 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 PLA2G2CQ5R387 149 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 ADGRF1Q5T601 910 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 EGFLAMQ63HQ2 1017 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 NUGGCQ68CJ6 796 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 SDE2Q6IQ49 451 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 DENND1BQ6P3S1 775 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 GJB7Q6PEY0 223 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 PRR23CQ6ZRP0 262 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 RBM43Q6ZSC3 357 aaKnown RBP10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 TOGARAM2Q6ZUX3 1019 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 TMEM110Q86TL2 294 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 UNC45BQ8IWX7 931 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 CHPFQ8IZ52 775 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 AZIN2Q96A70 460 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 P2RY11Q96G91 374 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 PIWIL1Q96J94 861 aaKnown RBP10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 SPACA7Q96KW9 195 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 GABRG3Q99928 467 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 TUBGCP2Q9BSJ2 902 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 TPSD1Q9BZJ3 242 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 SIX2Q9NPC8 291 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 SFMBT1Q9UHJ3 866 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 CDV3Q9UKY7 258 aaKnown RBP10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 HCN2Q9UL51 889 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 MUC22E2RYF6 1773 aaPredicted RBP10.85□□□□□ -0.67
PTCD2P1-201ENST00000554393 PI4KAP42356 2102 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 A0A1W2PQF6 199 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 TCRBV21S2A2A0A5A6 115 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 PRRT4C9JH25 899 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 GOLGA6L22H0YM25 854 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 IRAK2O43187 625 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 MSI1O43347 362 aaKnown RBP10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 ZNF806P0C7X5 589 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 NCAM1P13591 858 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 HOXD9P28356 352 aaPredicted RBP10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 P2RY2P41231 377 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 SLC11A2P49281 568 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 PTK2Q05397 1052 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 PDCLQ13371 301 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 ENPP2Q13822 863 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 ARHGAP44Q17R89 818 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 RSPO4Q2I0M5 234 aaPredicted RBP10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 SPDYCQ5MJ68 293 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 MPP7Q5T2T1 576 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 PMS2CLQ68D20 193 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 RNF43Q68DV7 783 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 ANKS1BQ7Z6G8 1248 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 SCUBE3Q8IX30 993 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 ZNF557Q8N988 423 aaPredicted RBP10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 ENOX1Q8TC92 643 aaKnown RBP10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 NETO1Q8TDF5 533 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 CLEC4CQ8WTT0 213 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 DDI1Q8WTU0 396 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 UCMAQ8WVF2 138 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 BHMTQ93088 406 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 SERPINB11Q96P15 392 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 MIS12Q9H081 205 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 ARRDC1-AS1Q9H2J1 176 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 CD248Q9HCU0 757 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 ST7Q9NRC1 585 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 VPS45Q9NRW7 570 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 PLK2Q9NYY3 685 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 BCCIPQ9P287 314 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 TLR6Q9Y2C9 796 aa10.84□□□□□ -0.67
PTCD2P1-201ENST00000554393 CNOT1A5YKK6 2376 aaKnown RBP10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 BCLAF3A2AJT9 711 aaKnown RBP10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 KCNJ18B7U540 433 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 E5RJQ4 531 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 PIK3R2O00459 728 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 DCLK1O15075 740 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 GPR37O15354 613 aa10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 ZBTB24O43167 697 aaPredicted RBP10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 PAPSS1O43252 624 aaPredicted RBP10.83□□□□□ -0.68
PTCD2P1-201ENST00000554393 TIMM44O43615 452 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms