RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 MTMR8Q96EF0 704 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 FDXACB1Q9BRP7 624 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-226ENST00000554350 INO80BQ9C086 356 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-226ENST00000554350 RNF41Q9H4P4 317 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-226ENST00000554350 PRDM16Q9HAZ2 1276 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 SMPD4Q9NXE4 827 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 CACNG4Q9UBN1 327 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 TMEFF2Q9UIK5 374 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-226ENST00000554350 NFASCO94856 1347 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 NEDD4P46934 1319 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 VWA8A3KMH1 1905 aa6.21□□□□□ -1.42
ATXN3-226ENST00000554350 C22orf46C9J442 243 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 HIP1O00291 1037 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 TLX3O43711 291 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-226ENST00000554350 CCNE2O96020 404 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 FGAP02671 866 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 SERPINF2P08697 491 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 FPR2P25090 351 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 CCR2P41597 374 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 DPP6P42658 865 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 SLC6A11P48066 632 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 ZNF143P52747 638 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-226ENST00000554350 ARPP19P56211 112 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 DSC1Q08554 894 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 NFATC3Q12968 1075 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 ITGB3BPQ13352 177 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-226ENST00000554350 SART3Q15020 963 aaKnown RBP6.2□□□□□ -1.42
ATXN3-226ENST00000554350 TEAD2Q15562 447 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 UBE2SQ16763 222 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 ITPRIPL2Q3MIP1 535 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 ARHGAP29Q52LW3 1261 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 IFIT1BQ5T764 474 aaKnown RBP6.2□□□□□ -1.42
ATXN3-226ENST00000554350 ARHGAP40Q5TG30 622 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 LMBRD2Q68DH5 695 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-226ENST00000554350 IQCEQ6IPM2 695 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 ABHD15Q6UXT9 468 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 DEFB119Q8N690 84 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 CEP76Q8TAP6 659 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 LNX1Q8TBB1 728 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-226ENST00000554350 OTUD7AQ8TE49 926 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-226ENST00000554350 RUFY2Q8WXA3 655 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 SEC16BQ96JE7 1060 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 NLRP4Q96MN2 994 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 UBAC1Q9BSL1 405 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 UBN1Q9NPG3 1134 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 MAD2L2Q9UI95 211 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 FBXL7Q9UJT9 491 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 CDY1Q9Y6F8 540 aa6.2□□□□□ -1.42
ATXN3-226ENST00000554350 IGKV6D-21A0A0A0MT36 114 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 GOLGA6L3A6NEY3 463 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 MEIS2O14770 477 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 MAFO75444 373 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-226ENST00000554350 PLATP00750 562 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 ATXN1LP0C7T5 689 aaKnown RBP6.19□□□□□ -1.42
ATXN3-226ENST00000554350 PCP11498 1178 aaKnown RBP6.19□□□□□ -1.42
ATXN3-226ENST00000554350 U2AF2P26368 475 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATXN3-226ENST00000554350 HSPA4P34932 840 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 DNM2P50570 870 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 SLC14A1Q13336 389 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 RAB33AQ14088 237 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 HSP90AA2PQ14568 343 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-226ENST00000554350 ALX1Q15699 326 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 KLHL40Q2TBA0 621 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 CR1LQ2VPA4 569 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 TMEM196Q5HYL7 178 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 FAM26FQ5R3K3 315 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 SYT13Q7L8C5 426 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 MRPL10Q7Z7H8 261 aaKnown RBP6.19□□□□□ -1.42
ATXN3-226ENST00000554350 RHPN2Q8IUC4 686 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 LINC01465Q8N7H1 131 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 SEC14L1Q92503 715 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 RSPRY1Q96DX4 576 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 MED8Q96G25 268 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 WBP1Q96G27 269 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 FAM167AQ96KS9 214 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 ZNF512Q96ME7 567 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-226ENST00000554350 MXRA8Q9BRK3 442 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 C1QTNF3Q9BXJ4 246 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 PSTPIP2Q9H939 334 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 TRPV4Q9HBA0 871 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 LY9Q9HBG7 655 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 CYP4F11Q9HBI6 524 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 AGO4Q9HCK5 861 aaKnown RBP6.19□□□□□ -1.42
ATXN3-226ENST00000554350 ASAH2Q9NR71 780 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 MIOSQ9NXC5 875 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 BCCIPQ9P287 314 aaKnown RBP eCLIP6.19□□□□□ -1.42
ATXN3-226ENST00000554350 GABBR1Q9UBS5 961 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 PILRBQ9UKJ0 227 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 HES2Q9Y543 173 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 X6R8D5 127 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 KIF26AQ9ULI4 1882 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-226ENST00000554350 AHCTF1Q8WYP5 2266 aa6.19□□□□□ -1.42
ATXN3-226ENST00000554350 MYH9P35579 1960 aaKnown RBP6.18□□□□□ -1.42
ATXN3-226ENST00000554350 CASTOR2A6NHX0 329 aa6.18□□□□□ -1.42
ATXN3-226ENST00000554350 MATN3O15232 486 aa6.18□□□□□ -1.42
ATXN3-226ENST00000554350 STAT5AP42229 794 aa6.18□□□□□ -1.42
ATXN3-226ENST00000554350 CDC42EP1Q00587 391 aa6.18□□□□□ -1.42
ATXN3-226ENST00000554350 SPIRE1Q08AE8 756 aa6.18□□□□□ -1.42
ATXN3-226ENST00000554350 FCHO2Q0JRZ9 810 aa6.18□□□□□ -1.42
ATXN3-226ENST00000554350 ADAM9Q13443 819 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms