RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 STON1Q9Y6Q2 735 aa6.91□□□□□ -1.3
SLIRP-203ENST00000554074 DOCK9Q9BZ29 2069 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 YJEFN3A6XGL0 299 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 PPP1R3GB7ZBB8 358 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 E7ENQ6 273 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 TULP2O00295 520 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 IRAK2O43187 625 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 FBXO21O94952 628 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 IGLV3-27P01718 113 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 NCAM1P13591 858 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 CD19P15391 556 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 CD44P16070 742 aaKnown RBP6.9□□□□□ -1.3
SLIRP-203ENST00000554074 ENGP17813 658 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 ITPKAP23677 461 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 HOXD9P28356 352 aaPredicted RBP6.9□□□□□ -1.3
SLIRP-203ENST00000554074 WASP42768 502 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 RPL34P49207 117 aaKnown RBP6.9□□□□□ -1.3
SLIRP-203ENST00000554074 DAOAP59103 153 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 GFPT1Q06210 699 aaPredicted RBP6.9□□□□□ -1.3
SLIRP-203ENST00000554074 RING1Q06587 406 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 NNTQ13423 1086 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 MORC3Q14149 939 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 MEA1Q16626 185 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 CCDC40Q4G0X9 1142 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 ADGRF1Q5T601 910 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 SH3PXD2AQ5TCZ1 1133 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 BSPRYQ5W0U4 402 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 PSAPL1Q6NUJ1 521 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 TMEM270Q6UE05 265 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 KIAA0907Q7Z7F0 614 aaPredicted RBP6.9□□□□□ -1.3
SLIRP-203ENST00000554074 FMNL3Q8IVF7 1028 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 TRIM59Q8IWR1 403 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 SIX6OS1Q8N1H7 587 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.9□□□□□ -1.3
SLIRP-203ENST00000554074 ZNF557Q8N988 423 aaPredicted RBP6.9□□□□□ -1.3
SLIRP-203ENST00000554074 CADM4Q8NFZ8 388 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 WFIKKN2Q8TEU8 576 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 DDI1Q8WTU0 396 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 RNF139Q8WU17 664 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 TFAP2BQ92481 460 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 ERCC4Q92889 916 aaPredicted RBP6.9□□□□□ -1.3
SLIRP-203ENST00000554074 FOXJ1Q92949 421 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 BHMTQ93088 406 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 AZIN2Q96A70 460 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 HSFY1Q96LI6 401 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 PCED1AQ9H1Q7 454 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 FBRSQ9HAH7 460 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 PRDM16Q9HAZ2 1276 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 ITM2CQ9NQX7 267 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 ELOVL2Q9NXB9 296 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 CACNA2D2Q9NY47 1150 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 SUSD2Q9UGT4 822 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 SLC6A14Q9UN76 642 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 CNTN6Q9UQ52 1028 aa6.9□□□□□ -1.3
SLIRP-203ENST00000554074 FRYQ5TBA9 3013 aa6.9□□□□□ -1.31
SLIRP-203ENST00000554074 PLXNA2O75051 1894 aa6.9□□□□□ -1.31
SLIRP-203ENST00000554074 KNTC1P50748 2209 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 WASH3PC4AMC7 463 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 SART1O43290 800 aaKnown RBP6.89□□□□□ -1.31
SLIRP-203ENST00000554074 SYNCRIPO60506 623 aaKnown RBP6.89□□□□□ -1.31
SLIRP-203ENST00000554074 NDUFS2O75306 463 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 GABBR2O75899 941 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 SYPP08247 313 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 HMBSP08397 361 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 GNSP15586 552 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 BMP6P22004 513 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 CD6P30203 668 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 OXTRP30559 389 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 IL12RB1P42701 662 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 ZNF252P-AS1Q0IIN9 211 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 SEMA3BQ13214 749 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 SLC14A1Q13336 389 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 CAMK2GQ13555 558 aaPredicted RBP6.89□□□□□ -1.31
SLIRP-203ENST00000554074 HNRNPDQ14103 355 aaKnown RBP6.89□□□□□ -1.31
SLIRP-203ENST00000554074 ZNF234Q14588 700 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 ST3GAL2Q16842 350 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 FUT11Q495W5 492 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 WDR45BQ5MNZ6 344 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 SYCP2LQ5T4T6 812 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 NUGGCQ68CJ6 796 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 PMF1Q6P1K2 205 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 BEND5Q7L4P6 421 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 ARMCX6Q7L4S7 300 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 PIP4P1Q86T03 277 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 SLC41A1Q8IVJ1 513 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 UNC45BQ8IWX7 931 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 AHI1Q8N157 1196 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 PPM1KQ8N3J5 372 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 TRIML1Q8N9V2 468 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 UBA3Q8TBC4 463 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 STK32AQ8WU08 396 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 NELFBQ8WX92 580 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 DNASE2BQ8WZ79 361 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 NDRG1Q92597 394 aaKnown RBP6.89□□□□□ -1.31
SLIRP-203ENST00000554074 TMA16Q96EY4 203 aaKnown RBP6.89□□□□□ -1.31
SLIRP-203ENST00000554074 FAM81BQ96LP2 452 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 HSPA12BQ96MM6 686 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 ZSWIM1Q9BR11 485 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 TRIM62Q9BVG3 475 aa6.89□□□□□ -1.31
SLIRP-203ENST00000554074 ZDHHC5Q9C0B5 715 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms