RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 WDR49Q8IV35 697 aa12.52□□□□□ -0.41
SPTB-206ENST00000553938 APLFQ8IW19 511 aaPredicted RBP12.52□□□□□ -0.41
SPTB-206ENST00000553938 TRPM4Q8TD43 1214 aa12.52□□□□□ -0.41
SPTB-206ENST00000553938 PGBD4Q96DM1 585 aa12.52□□□□□ -0.41
SPTB-206ENST00000553938 ADPGKQ9BRR6 497 aa12.52□□□□□ -0.41
SPTB-206ENST00000553938 TUT1Q9H6E5 874 aaKnown RBP12.52□□□□□ -0.41
SPTB-206ENST00000553938 COX16Q9P0S2 106 aa12.52□□□□□ -0.41
SPTB-206ENST00000553938 ZC3H7BQ9UGR2 993 aaKnown RBP12.52□□□□□ -0.41
SPTB-206ENST00000553938 SLC7A8Q9UHI5 535 aa12.52□□□□□ -0.41
SPTB-206ENST00000553938 NUP205Q92621 2012 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 TMEM247A6NEH6 219 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 APOC4-APOC2K7ER74 178 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 COPEO14579 308 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 GSRP00390 522 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 APOC2P02655 101 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 PFKMP08237 780 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 GPD2P43304 727 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 RASSF2P50749 326 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 RTP1P59025 263 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 LPCAT4Q643R3 524 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 PMF1Q6P1K2 205 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 FBXO16Q8IX29 292 aaPredicted RBP12.51□□□□□ -0.41
SPTB-206ENST00000553938 ADAM32Q8TC27 787 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 AGAP3Q96P47 875 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 ACAD9Q9H845 621 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 GJD2Q9UKL4 321 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 HES2Q9Y543 173 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 CITO14578 2027 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 SIP14410 1827 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 MYOCOSA0A1B0GUC4 107 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 VTNP04004 478 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 ITGA2BP08514 1039 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 POLR2BP30876 1174 aaKnown RBP12.51□□□□□ -0.41
SPTB-206ENST00000553938 ZNF362Q5T0B9 420 aaPredicted RBP12.51□□□□□ -0.41
SPTB-206ENST00000553938 NDUFAF2Q8N183 169 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 PNPLA1Q8N8W4 532 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 MPP4Q96JB8 637 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 TEX13BQ9BXU2 312 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 UNKQ9C0B0 810 aaKnown RBP12.51□□□□□ -0.41
SPTB-206ENST00000553938 CDT1Q9H211 546 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 GINS2Q9Y248 185 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 EFR3BQ9Y2G0 817 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 GMEB1Q9Y692 573 aa12.51□□□□□ -0.41
SPTB-206ENST00000553938 LOC100653049A0A140TA62 436 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 CCDC22O60826 627 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 USP12O75317 370 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 KRT34O76011 436 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 PIGRP01833 764 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 CCDC166P0CW27 439 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 PTPN11Q06124 597 aaPredicted RBP12.5□□□□□ -0.41
SPTB-206ENST00000553938 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPTB-206ENST00000553938 TEX44Q53QW1 395 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 GLRA4Q5JXX5 417 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 LRRC38Q5VT99 294 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 MOB2Q70IA6 237 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 CMASQ8NFW8 434 aaPredicted RBP12.5□□□□□ -0.41
SPTB-206ENST00000553938 TUBGCP5Q96RT8 1024 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 RNPEPQ9H4A4 650 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 DCLRE1BQ9H816 532 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 IKBKGQ9Y6K9 419 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 SLC15A5A6NIM6 579 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 CAPN14A8MX76 684 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 OGTO15294 1046 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 GSTA2P09210 222 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 PHBP35232 272 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 NDST1P52848 882 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 EPHB1P54762 984 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 LSAMPQ13449 338 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 NOMO1Q15155 1222 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 CCDC14Q49A88 953 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 DEFB132Q7Z7B7 95 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 ZNF554Q86TJ5 538 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 NIPA2Q8N8Q9 360 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 LGMNQ99538 433 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 VPS11Q9H270 941 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 DPEP3Q9H4B8 488 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 CACNG4Q9UBN1 327 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 SLC18A2Q05940 514 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 STXBP2Q15833 593 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 IZUMO2Q6UXV1 221 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 TNS4Q8IZW8 715 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 ACVR1CQ8NER5 493 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 LENG1Q96BZ8 264 aaPredicted RBP12.5□□□□□ -0.41
SPTB-206ENST00000553938 POM121Q96HA1 1249 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 RILPQ96NA2 401 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 DDX18Q9NVP1 670 aaKnown RBP12.5□□□□□ -0.41
SPTB-206ENST00000553938 PNPOQ9NVS9 261 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 RABL2BQ9UNT1 228 aa12.5□□□□□ -0.41
SPTB-206ENST00000553938 GOLGA8TH3BQL2 631 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 ASLP04424 464 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 KLHL38Q2WGJ6 581 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 TCHHL1Q5QJ38 904 aaPredicted RBP12.49□□□□□ -0.41
SPTB-206ENST00000553938 WASHC2DQ5SRD0 308 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 ATF7IP2Q5U623 682 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 SLFN12LQ6IEE8 588 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 CMC1Q7Z7K0 106 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 DDX56Q9NY93 547 aaKnown RBP12.49□□□□□ -0.41
SPTB-206ENST00000553938 SENP1Q9P0U3 644 aa12.49□□□□□ -0.41
SPTB-206ENST00000553938 TSPAN16Q9UKR8 245 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms