RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 DEPTORQ8TB45 409 aa7.54□□□□□ -1.2
PCNX1-205ENST00000553508 CELF1Q92879 486 aaKnown RBP7.54□□□□□ -1.2
PCNX1-205ENST00000553508 TRMT61AQ96FX7 289 aaKnown RBP7.54□□□□□ -1.2
PCNX1-205ENST00000553508 ZNF48Q96MX3 618 aaPredicted RBP7.54□□□□□ -1.2
PCNX1-205ENST00000553508 ELAC2Q9BQ52 826 aaKnown RBP7.54□□□□□ -1.2
PCNX1-205ENST00000553508 ELOVL1Q9BW60 279 aa7.54□□□□□ -1.2
PCNX1-205ENST00000553508 STK33Q9BYT3 514 aa7.54□□□□□ -1.2
PCNX1-205ENST00000553508 NLRC4Q9NPP4 1024 aa7.54□□□□□ -1.2
PCNX1-205ENST00000553508 NECTIN3Q9NQS3 549 aa7.54□□□□□ -1.2
PCNX1-205ENST00000553508 FBXO28Q9NVF7 368 aa7.54□□□□□ -1.2
PCNX1-205ENST00000553508 AFG3L2Q9Y4W6 797 aa7.54□□□□□ -1.2
PCNX1-205ENST00000553508 NPC1O15118 1278 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 PLIN1O60240 522 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 CTSAP10619 480 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 HOXD12P35452 270 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 RPS13P62277 151 aaKnown RBP7.53□□□□□ -1.2
PCNX1-205ENST00000553508 GRM4Q14833 912 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 SYCP2LQ5T4T6 812 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 XRRA1Q6P2D8 792 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 GGT6Q6P531 493 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 CCDC146Q8IYE0 955 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 SLC22A17Q8WUG5 538 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 COQ8BQ96D53 544 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 MCRS1Q96EZ8 462 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 SENP7Q9BQF6 1050 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 CDCP1Q9H5V8 836 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 HELLSQ9NRZ9 838 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 IGSF9Q9P2J2 1179 aa7.53□□□□□ -1.2
PCNX1-205ENST00000553508 SLC22A23A1A5C7 686 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 ITGA5P08648 1049 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 CD63P08962 238 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 PRF1P14222 555 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 SLC8A1P32418 973 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 STAT6P42226 847 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 HSF1Q00613 529 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 HNRNPA0Q13151 305 aaKnown RBP7.52□□□□□ -1.21
PCNX1-205ENST00000553508 STARD3Q14849 445 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 EARS2Q5JPH6 523 aaKnown RBP7.52□□□□□ -1.21
PCNX1-205ENST00000553508 C10orf25Q5T742 122 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 ARL6IP4Q66PJ3 421 aaKnown RBP7.52□□□□□ -1.21
PCNX1-205ENST00000553508 ANKRD13BQ86YJ7 626 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 NRACQ8N912 160 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 PMM1Q92871 262 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 GJA10Q969M2 543 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 RNF26Q9BY78 433 aaPredicted RBP7.52□□□□□ -1.21
PCNX1-205ENST00000553508 RXFP3Q9NSD7 469 aa7.52□□□□□ -1.21
PCNX1-205ENST00000553508 C2CD4BA6NLJ0 364 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 PCDH17O14917 1159 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 DHHO43323 396 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 TLR2O60603 784 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 BMP15O95972 392 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 HOXA7P31268 230 aaPredicted RBP7.51□□□□□ -1.21
PCNX1-205ENST00000553508 TECP42680 631 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 NR4A2P43354 598 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 RBM44Q6ZP01 1051 aaKnown RBP7.51□□□□□ -1.21
PCNX1-205ENST00000553508 MRPL10Q7Z7H8 261 aaKnown RBP7.51□□□□□ -1.21
PCNX1-205ENST00000553508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.51□□□□□ -1.21
PCNX1-205ENST00000553508 UEVLDQ8IX04 471 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 PIGOQ8TEQ8 1089 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 GLMPQ8WWB7 406 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 PRPF18Q99633 342 aaKnown RBP7.51□□□□□ -1.21
PCNX1-205ENST00000553508 ARFGAP3Q9NP61 516 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 CA14Q9ULX7 337 aa7.51□□□□□ -1.21
PCNX1-205ENST00000553508 NTSR2O95665 410 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 CER1O95813 267 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 IGKV2-30P06310 120 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 ANXA6P08133 673 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 PEPDP12955 493 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 KLRK1P26718 216 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 AKT1P31749 480 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 THBS4P35443 961 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 PPM1AP35813 382 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 CBFBQ13951 182 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 TRIM71Q2Q1W2 868 aaKnown RBP7.5□□□□□ -1.21
PCNX1-205ENST00000553508 DGKKQ5KSL6 1271 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 ANKRD40Q6AI12 368 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 DHRS13Q6UX07 377 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 ZNF793Q6ZN11 406 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 SVIPQ8NHG7 77 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 GPR78Q96P69 363 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 TRIM2Q9C040 744 aa7.5□□□□□ -1.21
PCNX1-205ENST00000553508 MAGED2Q9UNF1 606 aaPredicted RBP7.5□□□□□ -1.21
PCNX1-205ENST00000553508 AQP12BA6NM10 295 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 M0QYT0 321 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 SOCS2O14508 198 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 GLP2RO95838 553 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 RPS6KB1P23443 525 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 ZNF84P51523 738 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 ALDH18A1P54886 795 aaKnown RBP7.49□□□□□ -1.21
PCNX1-205ENST00000553508 BTKQ06187 659 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 LRCH2Q5VUJ6 765 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 RINT1Q6NUQ1 792 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 RFX6Q8HWS3 928 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 ADGRF4Q8IZF3 695 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 IGFBPL1Q8WX77 278 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 NPIPB3Q92617 1050 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 ZBTB9Q96C00 473 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 HMCESQ96FZ2 354 aa7.49□□□□□ -1.21
PCNX1-205ENST00000553508 ZNF845Q96IR2 970 aaPredicted RBP7.49□□□□□ -1.21
PCNX1-205ENST00000553508 TMEM79Q9BSE2 394 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms