RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 UNC93B1Q9H1C4 597 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 WDCPQ9H6R7 721 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 WDR6Q9NNW5 1121 aaKnown RBP9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 ANLNQ9NQW6 1124 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 RCOR3Q9P2K3 495 aaPredicted RBP9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 PRDM4Q9UKN5 801 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 PCDHB8Q9UN66 801 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 I6L893 689 aaPredicted RBP9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 EBAG9O00559 213 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 TCEA3O75764 348 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 METTL18O95568 372 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 VAV1P15498 845 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 ATP2A2P16615 1042 aaKnown RBP9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 TYMPP19971 482 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 SLC5A3P53794 718 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 ATN1P54259 1190 aaPredicted RBP9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 SF3A3Q12874 501 aaKnown RBP eCLIP9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 XRCC4Q13426 336 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 SDHAF4Q5VUM1 108 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 BHLHA9Q7RTU4 235 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 BNIPLQ7Z465 357 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 TAC4Q86UU9 113 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 TP53INP2Q8IXH6 220 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 FBF1Q8TES7 1133 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 ZNF473Q8WTR7 871 aaKnown RBP9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 RTP4Q96DX8 246 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 CFAP36Q96G28 342 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 B3GALT6Q96L58 329 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 PKMYT1Q99640 499 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 TKTL2Q9H0I9 626 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 HCSTQ9UBK5 93 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 NUDT5Q9UKK9 219 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 PHF24Q9UPV7 400 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 SNX10Q9Y5X0 201 aa9.39□□□□□ -0.91
RAB3IP-218ENST00000553099 FAM107AO95990 144 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 GCAP28676 217 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 ARPP19P56211 112 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 BFSP2Q13515 415 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 BZW1Q7L1Q6 419 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 IGDCC3Q8IVU1 814 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 FAM126BQ8IXS8 530 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 SCLYQ96I15 445 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 DEFB118Q96PH6 123 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 KIF9Q9HAQ2 790 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 TMEM161AQ9NX61 479 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 KANSL3Q9P2N6 904 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 LGALS13Q9UHV8 139 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 LRFN2Q9ULH4 789 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 PCDHB7Q9Y5E2 793 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 E7ESA3 106 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 INPPL1O15357 1258 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 ERCC2P18074 760 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 PBX3P40426 434 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 GEMIN4P57678 1058 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 FAM171A1Q5VUB5 890 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 BTBD8Q5XKL5 378 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 VSTM1Q6UX27 236 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 CPLX4Q7Z7G2 160 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 RIBC1Q8N443 379 aaPredicted RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 GDAP1Q8TB36 358 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 DQX1Q8TE96 717 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 ATXN2LQ8WWM7 1075 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 OLFM3Q96PB7 478 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 SLC9A7Q96T83 725 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 FERMT1Q9BQL6 677 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 SIK2Q9H0K1 926 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 PRDM12Q9H4Q4 367 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 PSMC3IPQ9P2W1 217 aaPredicted RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 OR12D3Q9UGF7 316 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 SFMBT1Q9UHJ3 866 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 FBXW11Q9UKB1 542 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 NT5C1B-RDH14C9J2C7 533 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 ANKRD65E5RJM6 399 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 KCNK1O00180 336 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 RNF103O00237 685 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 PPP1R12AO14974 1030 aaPredicted RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 MSI1O43347 362 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 SPAG7O75391 227 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 STK10O94804 968 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 F9P00740 461 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 SRGAP2BP0DMP2 458 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 PAX3P23760 479 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 EPHB2P29323 1055 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 DPYSQ14117 519 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 MTFR1Q15390 333 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 PKN2Q16513 984 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 ANKRD20A2Q5SQ80 823 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 ANKRD20A1Q5TYW2 823 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 ANKRD20A3Q5VUR7 823 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 PM20D1Q6GTS8 502 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 TADA2BQ86TJ2 420 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 C4orf33Q8N1A6 199 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 IRGQQ8WZA9 623 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 NTAN1Q96AB6 310 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 P2RY11Q96G91 374 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 PAFAH2Q99487 392 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 PAIP2Q9BPZ3 127 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 PHACTR1Q9C0D0 580 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 RRN3Q9NYV6 651 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms