RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 HGSNATQ68CP4 663 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 NAIF1Q69YI7 327 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 C12orf40Q86WS4 652 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 TMEM25Q86YD3 366 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 PHTF2Q8N3S3 785 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 DTWD2Q8NBA8 298 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 C3orf20Q8ND61 904 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 NT5C3BQ969T7 300 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 PGAP3Q96FM1 320 aaPredicted RBP12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 NPY6RQ99463 290 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 DNAJC7Q99615 494 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 METTL5Q9NRN9 209 aaKnown RBP12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 DDIT4Q9NX09 232 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 TMEM59LQ9UK28 342 aa12.18□□□□□ -0.46
TRAFD1-209ENST00000552896 VPS13AQ96RL7 3174 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 SPAG17Q6Q759 2223 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 ACSL4O60488 711 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 MFAP3LO75121 409 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 CYBBP04839 570 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 GZMAP12544 262 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 CCR1P32246 355 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 FLT3P36888 993 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 SULT1E1P49888 294 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 GALK1P51570 392 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 PPP2R5DQ14738 602 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 SLC25A52Q3SY17 297 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 FAM133BQ5BKY9 247 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 FYB2Q5VWT5 728 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 ACAD10Q6JQN1 1059 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 TPGS1Q6ZTW0 290 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 VPS36Q86VN1 386 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 GAS2L3Q86XJ1 694 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 MCOLN2Q8IZK6 566 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 CCDC26Q8TAB7 109 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 CPLX3Q8WVH0 158 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 VCPIP1Q96JH7 1222 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 BTN2A3PQ96KV6 586 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 XPO6Q96QU8 1125 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 PNKPQ96T60 521 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 DDX50Q9BQ39 737 aaKnown RBP12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 TRIM5Q9C035 493 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 TAS2R14Q9NYV8 317 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 PAXBP1Q9Y5B6 917 aa12.17□□□□□ -0.46
TRAFD1-209ENST00000552896 TCRBV5S1A1TA0A578 114 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 M0QYT0 321 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 DDX3XO00571 662 aaKnown RBP eCLIP12.16□□□□□ -0.463e-8■■■□□ 18.8
TRAFD1-209ENST00000552896 AP5Z1O43299 807 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 TULP3O75386 442 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 KAT7O95251 611 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 F9P00740 461 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 EGFP01133 1207 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 APODP05090 189 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 SKILP12757 684 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 HOXD9P28356 352 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 RNASE9P60153 205 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 KDSRQ06136 332 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 ZC3H12AQ5D1E8 599 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 BRMS1LQ5PSV4 323 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 RNF43Q68DV7 783 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 NADSYN1Q6IA69 706 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 TRNP1Q6NT89 227 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 DNAJC24Q6P3W2 148 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 MAMSTRQ6ZN01 415 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 BNIPLQ7Z465 357 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 CNGA4Q8IV77 575 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 DRC7Q8IY82 874 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 ATP6V0D2Q8N8Y2 350 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 TERB1Q8NA31 727 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 EZH1Q92800 747 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 TRIM11Q96F44 468 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 MRFAP1L1Q96HT8 127 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 PRICKLE1Q96MT3 831 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 TBCBQ99426 244 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 SELENOOQ9BVL4 669 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 ADAM33Q9BZ11 813 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 LMAN1LQ9HAT1 526 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 PRMT8Q9NR22 394 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 ARHGEF4Q9NR80 690 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 RBM12Q9NTZ6 932 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 PIGVQ9NUD9 493 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 DNAJC17Q9NVM6 304 aaKnown RBP12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 DEC1Q9P2X7 70 aa12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 ARIH1Q9Y4X5 557 aaPredicted RBP12.16□□□□□ -0.46
TRAFD1-209ENST00000552896 SYNJ2BP-COX16A0A087WUM0 186 aa12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 TYW5A2RUC4 315 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 C2CD4BA6NLJ0 364 aa12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 KCNU1A8MYU2 1149 aa12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 MOCS2O96007 188 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 KRT3P12035 628 aa12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 TFE3P19532 575 aaPredicted RBP12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 ABCB4P21439 1286 aa12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 SDC4P31431 198 aa12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 SLC6A4P31645 630 aa12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 RDXP35241 583 aaKnown RBP12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 GRIA2P42262 883 aa12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 PTPN9P43378 593 aa12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 DGKGP49619 791 aa12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 CXCR3P49682 368 aa12.15□□□□□ -0.46
TRAFD1-209ENST00000552896 MTAPQ13126 283 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms