RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 VSTM4Q8IW00 320 aa11.3□□□□□ -0.6
CNOT2-239ENST00000552483 TBCBQ99426 244 aa11.3□□□□□ -0.6
CNOT2-239ENST00000552483 NUP58Q9BVL2 599 aa11.3□□□□□ -0.6
CNOT2-239ENST00000552483 NUCKS1Q9H1E3 243 aaKnown RBP11.3□□□□□ -0.6
CNOT2-239ENST00000552483 FAM204AQ9H8W3 233 aa11.3□□□□□ -0.6
CNOT2-239ENST00000552483 TMPRSS4Q9NRS4 437 aa11.3□□□□□ -0.6
CNOT2-239ENST00000552483 FAM86C1Q9NVL1 165 aa11.3□□□□□ -0.6
CNOT2-239ENST00000552483 SPATA6Q9NWH7 488 aaPredicted RBP11.3□□□□□ -0.6
CNOT2-239ENST00000552483 CAPN11Q9UMQ6 739 aa11.3□□□□□ -0.6
CNOT2-239ENST00000552483 TLR6Q9Y2C9 796 aa11.3□□□□□ -0.6
CNOT2-239ENST00000552483 HCN4Q9Y3Q4 1203 aa11.3□□□□□ -0.6
CNOT2-239ENST00000552483 TMCO5BA8MYB1 307 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 NCAM2O15394 837 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
CNOT2-239ENST00000552483 KAT7O95251 611 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 TDGF1P13385 188 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 TNFAIP3P21580 790 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 HOXD9P28356 352 aaPredicted RBP11.29□□□□□ -0.6
CNOT2-239ENST00000552483 NOS2P35228 1153 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 GGCXP38435 758 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 EIF2DP41214 584 aaKnown RBP11.29□□□□□ -0.6
CNOT2-239ENST00000552483 MATKP42679 507 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 NSFP46459 744 aaKnown RBP11.29□□□□□ -0.6
CNOT2-239ENST00000552483 HARS2P49590 506 aaKnown RBP11.29□□□□□ -0.6
CNOT2-239ENST00000552483 SULT1E1P49888 294 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 SEC13P55735 322 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 GSCP56915 257 aaPredicted RBP11.29□□□□□ -0.6
CNOT2-239ENST00000552483 ZBED6P86452 979 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 CDK17Q00537 523 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 KLHL30Q0D2K2 578 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 GRSF1Q12849 480 aaKnown RBP eCLIP11.29□□□□□ -0.6
CNOT2-239ENST00000552483 LRRC32Q14392 662 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 EMC10Q5UCC4 262 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 NUGGCQ68CJ6 796 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 BNIPLQ7Z465 357 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 C1orf210Q8IVY1 113 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 WFDC5Q8TCV5 224 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 NT5C3BQ969T7 300 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 CFAP57Q96MR6 1250 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 PNKPQ96T60 521 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 PHOX2BQ99453 314 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 PRMT8Q9NR22 394 aaPredicted RBP11.29□□□□□ -0.6
CNOT2-239ENST00000552483 ARHGEF4Q9NR80 690 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 PIGVQ9NUD9 493 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 DNAJC17Q9NVM6 304 aaKnown RBP11.29□□□□□ -0.6
CNOT2-239ENST00000552483 DDIT4Q9NX09 232 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.29□□□□□ -0.62e-7■■■■□ 21.2
CNOT2-239ENST00000552483 ADAM22Q9P0K1 906 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 FBXO10Q9UK96 956 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 ZNF510Q9Y2H8 683 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 SNX10Q9Y5X0 201 aa11.29□□□□□ -0.6
CNOT2-239ENST00000552483 KCNU1A8MYU2 1149 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 PRRT4C9JH25 899 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 M0QYT0 321 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 CBFA2T2O43439 604 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 LATS1O95835 1130 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 HNRNPLP14866 589 aaKnown RBP eCLIP11.28□□□□□ -0.65e-6■□□□□ 9.5
CNOT2-239ENST00000552483 DRD1P21728 446 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 RRM1P23921 792 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 CHKAP35790 457 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 MAGEA9P43362 315 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 IRAK1P51617 712 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 NUBP1P53384 320 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 AMPD2Q01433 879 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 DMWDQ09019 674 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 NME3Q13232 169 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 C15orf59Q2T9L4 293 aaPredicted RBP11.28□□□□□ -0.6
CNOT2-239ENST00000552483 ARTNQ5T4W7 220 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 ADGRF1Q5T601 910 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 SH3PXD2AQ5TCZ1 1133 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 PIK3R6Q5UE93 754 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 RAP1GAP2Q684P5 730 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 RNF43Q68DV7 783 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 GRAMD4Q6IC98 578 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 ACAD10Q6JQN1 1059 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 WDR59Q6PJI9 974 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 SARM1Q6SZW1 724 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 MCOLN2Q8IZK6 566 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 TERB1Q8NA31 727 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 RPLP0P6Q8NHW5 317 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 USP33Q8TEY7 942 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 RXFP2Q8WXD0 754 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 PRMT1Q99873 361 aaKnown RBP11.28□□□□□ -0.6
CNOT2-239ENST00000552483 TRIM62Q9BVG3 475 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 DOCK4Q8N1I0 1966 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 MUC6Q6W4X9 2439 aa11.28□□□□□ -0.6
CNOT2-239ENST00000552483 NYNRINQ9P2P1 1898 aaKnown RBP11.27□□□□□ -0.6
CNOT2-239ENST00000552483 A0A0A0MRY4 1105 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 C2CD4BA6NLJ0 364 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 K7ESF4 209 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 ADCY5O95622 1261 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 APOEP02649 317 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 APODP05090 189 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 CALB1P05937 261 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 CCDC172P0C7W6 258 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 SP9P0CG40 484 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 TACR2P21452 398 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 TIE1P35590 1138 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 GRIA2P42262 883 aa11.27□□□□□ -0.61
CNOT2-239ENST00000552483 KIR2DL1P43626 348 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms