RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	CCDC85C	A6NKD9	419 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480		H7C0C1	242 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480		I6L893	689 aa	Predicted RBP	13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	CREB3	O43889	395 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	SEC24A	O95486	1093 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	ZDHHC11B	P0C7U3	371 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	RARG	P13631	454 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	AMPD1	P23109	780 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	CCR1	P32246	355 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	ATP5O	P48047	213 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	TPI1	P60174	286 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	XRCC4	Q13426	336 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	MTMR3	Q13615	1198 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	DARS2	Q6PI48	645 aa	Known RBP	13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	PDZD8	Q8NEN9	1154 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	GIPC2	Q8TF65	315 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	HAPLN3	Q96S86	360 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	EPAS1	Q99814	870 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	MTIF3	Q9H2K0	278 aa	Known RBP	13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	RXFP1	Q9HBX9	757 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	SFMBT1	Q9UHJ3	866 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	TLR6	Q9Y2C9	796 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	YIPF1	Q9Y548	306 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	HEY1	Q9Y5J3	304 aa		13.14	□□□□□ -0.31
CACNB3-223	ENST00000552480	FAM72C	H0Y354	149 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	DNALI1	O14645	258 aa	Predicted RBP	13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	DCLK1	O15075	740 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	MSI1	O43347	362 aa	Known RBP	13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	LILRB3	O75022	631 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	CSH1	P0DML2	217 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	CSH2	P0DML3	217 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	CTSA	P10619	480 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	SLC2A3	P11169	496 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	ATP2A2	P16615	1042 aa	Known RBP	13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	SYN1	P17600	705 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	STIP1	P31948	543 aa	Known RBP	13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	HTR7	P34969	479 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	VPS41	P49754	854 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	ITGA8	P53708	1063 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	GDF10	P55107	478 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	PAFAH1B3	Q15102	231 aa	Known RBP	13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	P3H1	Q32P28	736 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	FAM72A	Q5TYM5	149 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	RASIP1	Q5U651	963 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	IZUMO3	Q5VZ72	239 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	FAM72D	Q6L9T8	149 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	RHBDF2	Q6PJF5	856 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	BZW1	Q7L1Q6	419 aa	Known RBP	13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	TMC3	Q7Z5M5	1100 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	ZC3H18	Q86VM9	953 aa	Known RBP	13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	FAM72B	Q86X60	149 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	UNC45B	Q8IWX7	931 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	ZNF276	Q8N554	614 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	GLIS1	Q8NBF1	620 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	TSEN2	Q8NCE0	465 aa	Known RBP	13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	AUTS2	Q8WXX7	1259 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	RTP4	Q96DX8	246 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	ABHD8	Q96I13	439 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	UBE2O	Q9C0C9	1292 aa	Known RBP	13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	CYP4F11	Q9HBI6	524 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	ETNK2	Q9NVF9	386 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	OR12D3	Q9UGF7	316 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	ANAPC5	Q9UJX4	755 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	RAD54B	Q9Y620	910 aa		13.13	□□□□□ -0.31
CACNB3-223	ENST00000552480	KCNU1	A8MYU2	1149 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	HACD1	B0YJ81	288 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	TP73	O15350	636 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	TLL1	O43897	1013 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	MFSD11	O43934	449 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	PPFIA2	O75334	1257 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	IFNB1	P01574	187 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	ZSCAN5DP	P0CG00	497 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	ETS1	P14921	441 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	DNAJB2	P25686	324 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	ELF1	P32519	619 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	ALDH1A3	P47895	512 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	TBX4	P57082	545 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	NRG1	Q02297	640 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	GBE1	Q04446	702 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	DHX9	Q08211	1270 aa	Known RBP	13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	EFEMP1	Q12805	493 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	SLC10A2	Q12908	348 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	GPS1	Q13098	491 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	TRIP4	Q15650	581 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	SLC45A4	Q5BKX6	768 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	SPDYC	Q5MJ68	293 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	SNX30	Q5VWJ9	437 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	ALS2CL	Q60I27	953 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	PDZD4	Q76G19	769 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	PRUNE1	Q86TP1	453 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	TCEAL8	Q8IYN2	117 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	FAM71D	Q8N9W8	422 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	KLHL23	Q8NBE8	558 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	TRMT2B	Q96GJ1	504 aa	Known RBP	13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	SLC39A13	Q96H72	371 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms