RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 RASA2Q15283 850 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 TPSAB1Q15661 275 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 TCTN1Q2MV58 587 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 FAM72AQ5TYM5 149 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 FAM72DQ6L9T8 149 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 C4orf22Q6V702 233 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 RFX8Q6ZV50 586 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 TADA2BQ86TJ2 420 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 TAC4Q86UU9 113 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 TRABD2AQ86V40 505 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 FAM72BQ86X60 149 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 MCUQ8NE86 351 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 DQX1Q8TE96 717 aaKnown RBP11.9□□□□□ -0.5
RAB5C-208ENST00000551338 EDEM1Q92611 657 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 DHRS4Q9BTZ2 278 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 FTHL17Q9BXU8 183 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 FRMD8Q9BZ67 464 aaPredicted RBP11.9□□□□□ -0.5
RAB5C-208ENST00000551338 KLC2Q9H0B6 622 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 ZCWPW1Q9H0M4 648 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 ACSS3Q9H6R3 686 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 INTS9Q9NV88 658 aaKnown RBP11.9□□□□□ -0.5
RAB5C-208ENST00000551338 DDIT4Q9NX09 232 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 DNAJB4Q9UDY4 337 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 FETUBQ9UGM5 382 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 SLC24A2Q9UI40 661 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 FBXW11Q9UKB1 542 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 NR2E3Q9Y5X4 410 aa11.9□□□□□ -0.5
RAB5C-208ENST00000551338 A0A0A0MRY4 1105 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 TNFRSF10BO14763 440 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 IGLV3-25P01717 112 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 BRAFP15056 766 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 ERCC2P18074 760 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 MAGEA3P43357 314 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 OR1G1P47890 313 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 GATMP50440 423 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 TPI1P60174 286 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 YWHAHQ04917 246 aaPredicted RBP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 SEMA5AQ13591 1074 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 MPP2Q14168 576 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 PKN2Q16513 984 aaKnown RBP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 QPCTQ16769 361 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 PLEKHG4Q58EX7 1191 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 SYCP2LQ5T4T6 812 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 BSPRYQ5W0U4 402 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 HEATR6Q6AI08 1181 aaKnown RBP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 C4orf50Q6ZRC1 276 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 BEND5Q7L4P6 421 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 CAND1Q86VP6 1230 aaKnown RBP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 SPATA2LQ8IUW3 424 aaPredicted RBP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 TP53INP2Q8IXH6 220 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 SRRM1Q8IYB3 904 aaKnown RBP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 NETO2Q8NC67 525 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 DBF4BQ8NFT6 615 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 FBF1Q8TES7 1133 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 TFB1MQ8WVM0 346 aaKnown RBP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 HTR3CQ8WXA8 447 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 SPATA13Q96N96 652 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 ZNF317Q96PQ6 595 aaPredicted RBP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 ZMYND15Q9H091 742 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 UNC93B1Q9H1C4 597 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 ELAC1Q9H777 363 aaKnown RBP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 KANSL3Q9P2N6 904 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 PSMC3IPQ9P2W1 217 aaPredicted RBP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 PRG3Q9Y2Y8 225 aaPredicted RBP11.89□□□□□ -0.51
RAB5C-208ENST00000551338 TTLL3Q9Y4R7 772 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 SNX10Q9Y5X0 201 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 COL4A6Q14031 1691 aa11.89□□□□□ -0.51
RAB5C-208ENST00000551338 IRAK2O43187 625 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 F9P00740 461 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 C1QAP02745 245 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 COL6A1P12109 1028 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 FDFT1P37268 417 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 HCAR3P49019 387 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 GLUD2P49448 558 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 SLC5A3P53794 718 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 NR1H3Q13133 447 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 BFSP2Q13515 415 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 EIF4EBP2Q13542 120 aaPredicted RBP11.88□□□□□ -0.51
RAB5C-208ENST00000551338 KLHL38Q2WGJ6 581 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 ANKRD20A2Q5SQ80 823 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 ANKRD20A1Q5TYW2 823 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 ANKRD20A3Q5VUR7 823 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 BZW1Q7L1Q6 419 aaKnown RBP11.88□□□□□ -0.51
RAB5C-208ENST00000551338 PALM2Q8IXS6 379 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 VPS52Q8N1B4 723 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 NPWQ8N729 165 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 ANKRD42Q8N9B4 389 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 SCAMP5Q8TAC9 235 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 SH3TC2Q8TF17 1288 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 DCAKDQ8WVC6 231 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 CHMP6Q96FZ7 201 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 PAFAH2Q99487 392 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 LGMNQ99538 433 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 PRMT1Q99873 361 aaKnown RBP11.88□□□□□ -0.51
RAB5C-208ENST00000551338 COLEC11Q9BWP8 271 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 FAM107BQ9H098 131 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 PRDM12Q9H4Q4 367 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 PLAC1Q9HBJ0 212 aa11.88□□□□□ -0.51
RAB5C-208ENST00000551338 PTPRSQ13332 1948 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms