RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 APOEP02649 317 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 CHRM1P11229 460 aaPredicted RBP16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 NOS2P35228 1153 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 DGKGP49619 791 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 FIGNQ5HY92 759 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 ERMP1Q7Z2K6 904 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 XYLT1Q86Y38 959 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 ADAM32Q8TC27 787 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 RUBCNQ92622 972 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 P2RY11Q96G91 374 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 EDEM3Q9BZQ6 932 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 TTYH3Q9C0H2 523 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 FAM204AQ9H8W3 233 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 TMEM51Q9NW97 253 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 C2orf42Q9NWW7 574 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 STAP1Q9ULZ2 295 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 SLC8A2Q9UPR5 921 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 SLC27A6Q9Y2P4 619 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 STARD13Q9Y3M8 1113 aa16.03■□□□□ 0.16
PRPF40B-211ENST00000551063 CCDC163A0A0D9SF12 145 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 LILRB5O75023 590 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 GRAP2O75791 330 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 CISD3P0C7P0 127 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 SLC2A3P11169 496 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 UNGP13051 313 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 MMP8P22894 467 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 GBP1P32455 592 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 MATKP42679 507 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 KIR2DL1P43626 348 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 SEC13P55735 322 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 CENPCQ03188 943 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 MTA1Q13330 715 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 FAM133BQ5BKY9 247 aaKnown RBP16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 C10orf76Q5T2E6 689 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 MPP7Q5T2T1 576 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 FAM102AQ5T9C2 384 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 RNF43Q68DV7 783 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 LRSAM1Q6UWE0 723 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 ARCQ7LC44 396 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 TRMT11Q7Z4G4 463 aaKnown RBP16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 CAMKK1Q8N5S9 505 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 ZNF557Q8N988 423 aaPredicted RBP16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 DDI1Q8WTU0 396 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 ATRIPQ8WXE1 791 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 CPA5Q8WXQ8 436 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 BHMTQ93088 406 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 HINFPQ9BQA5 517 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 SLC2A11Q9BYW1 496 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 TSPY26PQ9H489 355 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 DDIT4Q9NX09 232 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 PLK2Q9NYY3 685 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 MMP17Q9ULZ9 603 aa16.02■□□□□ 0.16
PRPF40B-211ENST00000551063 TRIM24O15164 1050 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 HOXD9P28356 352 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 PBX1P40424 430 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 NSFP46459 744 aaKnown RBP16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 GSCP56915 257 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 UBASH3AP57075 661 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 PITX1P78337 314 aaPredicted RBP16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 ARID5AQ03989 594 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 DMC1Q14565 340 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 C2orf27AQ580R0 203 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 EOGTQ5NDL2 527 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 MMS22LQ6ZRQ5 1243 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 LONP2Q86WA8 852 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 SFTPA1Q8IWL2 248 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 SUMF1Q8NBK3 374 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 IQCDQ96DY2 449 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 TMA16Q96EY4 203 aaKnown RBP16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 BTN2A3PQ96KV6 586 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 PCDHB18PQ96TA0 734 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 AGPAT1Q99943 283 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 NUP58Q9BVL2 599 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 CFAP54Q96N23 3096 aa16.01■□□□□ 0.15
PRPF40B-211ENST00000551063 TYW5A2RUC4 315 aaKnown RBP16■□□□□ 0.15
PRPF40B-211ENST00000551063 LRRC53A6NM62 1247 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 TPM3P06753 285 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 SLC6A4P31645 630 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 CCR1P32246 355 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 TIE1P35590 1138 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 EIF4HQ15056 248 aaKnown RBP16■□□□□ 0.15
PRPF40B-211ENST00000551063 CLEC16AQ2KHT3 1053 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 ZC3H12AQ5D1E8 599 aaKnown RBP16■□□□□ 0.15
PRPF40B-211ENST00000551063 PIK3R6Q5UE93 754 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 NADSYN1Q6IA69 706 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 IRF2BP2Q7Z5L9 587 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 ANKS1BQ7Z6G8 1248 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 PHF13Q86YI8 300 aaPredicted RBP16■□□□□ 0.15
PRPF40B-211ENST00000551063 ZNF513Q8N8E2 541 aaPredicted RBP16■□□□□ 0.15
PRPF40B-211ENST00000551063 ATP6V0D2Q8N8Y2 350 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 IL17RCQ8NAC3 791 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 HJURPQ8NCD3 748 aaPredicted RBP16■□□□□ 0.15
PRPF40B-211ENST00000551063 TSTD1Q8NFU3 115 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 NT5C3BQ969T7 300 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 PGAP3Q96FM1 320 aaPredicted RBP16■□□□□ 0.15
PRPF40B-211ENST00000551063 NPY6RQ99463 290 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 C11orf70Q9BRQ4 267 aa16■□□□□ 0.15
PRPF40B-211ENST00000551063 SYT11Q9BT88 431 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms