RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 ADAM28Q9UKQ2 775 aa8.28□□□□□ -1.08
LETMD1-225ENST00000550715 VWA8A3KMH1 1905 aa8.28□□□□□ -1.08
LETMD1-225ENST00000550715 COL5A1P20908 1838 aaPredicted RBP8.28□□□□□ -1.08
LETMD1-225ENST00000550715 UTP20O75691 2785 aaKnown RBP8.27□□□□□ -1.09
LETMD1-225ENST00000550715 ZC3H12DA2A288 527 aaKnown RBP8.27□□□□□ -1.09
LETMD1-225ENST00000550715 ARL5CA6NH57 179 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 ENO4A6NNW6 628 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 NUDT19A8MXV4 375 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 KRIT1O00522 736 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 SLC27A2O14975 620 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 TLX3O43711 291 aaPredicted RBP8.27□□□□□ -1.09
LETMD1-225ENST00000550715 OPHN1O60890 802 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 TADA2AO75478 443 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 CPEP16870 476 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 PTGER3P43115 390 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 PSMD5Q16401 504 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 ADGRF1Q5T601 910 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 IQCA1Q86XH1 822 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 KIF18BQ86Y91 864 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 DCP2Q8IU60 420 aaKnown RBP8.27□□□□□ -1.09
LETMD1-225ENST00000550715 YAF2Q8IY57 180 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 FRMD1Q8N878 549 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 TMEM209Q96SK2 561 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 PAAF1Q9BRP4 392 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 TTPALQ9BTX7 342 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 LRRCC1Q9C099 1032 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 IFT22Q9H7X7 185 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 AGO4Q9HCK5 861 aaKnown RBP8.27□□□□□ -1.09
LETMD1-225ENST00000550715 CRTAC1Q9NQ79 661 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 DSEQ9UL01 958 aa8.27□□□□□ -1.09
LETMD1-225ENST00000550715 APOBEC2Q9Y235 224 aaKnown RBP8.27□□□□□ -1.09
LETMD1-225ENST00000550715 OAS3Q9Y6K5 1087 aaKnown RBP8.27□□□□□ -1.09
LETMD1-225ENST00000550715 CABIN1Q9Y6J0 2220 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 MAFO75444 373 aaPredicted RBP8.26□□□□□ -1.09
LETMD1-225ENST00000550715 APBB3O95704 486 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 EGFP01133 1207 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 LTFP02788 710 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 CFIP05156 583 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 C6P13671 934 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 BPIP17213 487 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 HOXA11P31270 313 aaPredicted RBP8.26□□□□□ -1.09
LETMD1-225ENST00000550715 AFMP43652 599 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 SCNN1GP51170 649 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 ATXN3P54252 364 aaPredicted RBP8.26□□□□□ -1.09
LETMD1-225ENST00000550715 FCHO2Q0JRZ9 810 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 MAPK6Q16659 721 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 UBE2SQ16763 222 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 USP39Q53GS9 565 aaKnown RBP8.26□□□□□ -1.09
LETMD1-225ENST00000550715 CCDC178Q5BJE1 867 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 TMEM196Q5HYL7 178 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 C20orf194Q5TEA3 1177 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 FAM171A1Q5VUB5 890 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 CPZQ66K79 652 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 CATSPER4Q7RTX7 472 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 SYT12Q8IV01 421 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 FTSJ3Q8IY81 847 aaKnown RBP8.26□□□□□ -1.09
LETMD1-225ENST00000550715 MINDY1Q8N5J2 469 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 NETO2Q8NC67 525 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 UHMK1Q8TAS1 419 aaKnown RBP8.26□□□□□ -1.09
LETMD1-225ENST00000550715 HASPINQ8TF76 798 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 LY9Q9HBG7 655 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 PCDHA6Q9UN73 950 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 ITPR2Q14571 2701 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 ATXN2Q99700 1313 aaKnown RBP8.26□□□□□ -1.09
LETMD1-225ENST00000550715 CNTNAP2Q9UHC6 1331 aa8.26□□□□□ -1.09
LETMD1-225ENST00000550715 SETD2Q9BYW2 2564 aaPredicted RBP8.25□□□□□ -1.09
LETMD1-225ENST00000550715 SLC12A8A0AV02 714 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 SCDO00767 359 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 ZNF197O14709 1029 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 SGSM2O43147 1006 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 CBFA2T3O75081 653 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 FKBP9O95302 570 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 SFPQP23246 707 aaKnown RBP eCLIP8.25□□□□□ -1.09
LETMD1-225ENST00000550715 KIF5BP33176 963 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 MLH1P40692 756 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 IRF9Q00978 393 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 DMC1Q14565 340 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 EMC4Q5J8M3 183 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 CREB3L3Q68CJ9 461 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 MIS18BP1Q6P0N0 1132 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 FKBP9P1Q75LS8 142 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 COG1Q8WTW3 980 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 RLN3Q8WXF3 142 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 CHFRQ96EP1 664 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 INTS4Q96HW7 963 aaKnown RBP8.25□□□□□ -1.09
LETMD1-225ENST00000550715 FNBP1Q96RU3 617 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 BOCQ9BWV1 1114 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 ZFP64Q9NPA5 681 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 SPTLC3Q9NUV7 552 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 MYOTQ9UBF9 498 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 PILRBQ9UKJ0 227 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 HES2Q9Y543 173 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 PCDHB4Q9Y5E5 795 aa8.25□□□□□ -1.09
LETMD1-225ENST00000550715 KIF26AQ9ULI4 1882 aaPredicted RBP8.25□□□□□ -1.09
LETMD1-225ENST00000550715 MYH9P35579 1960 aaKnown RBP8.24□□□□□ -1.09
LETMD1-225ENST00000550715 KNL1Q8NG31 2342 aa8.24□□□□□ -1.09
LETMD1-225ENST00000550715 CACNA1DQ01668 2161 aa8.24□□□□□ -1.09
LETMD1-225ENST00000550715 ARHGEF37A1IGU5 675 aa8.24□□□□□ -1.09
LETMD1-225ENST00000550715 HGSO14964 777 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms