RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 C16orf89Q6UX73 402 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 R3HCC1LQ7Z5L2 792 aaKnown RBP5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 KRTAP1-3Q8IUG1 177 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 PNPLA1Q8N8W4 532 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 B3GALNT2Q8NCR0 500 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 C1orf131Q8NDD1 294 aaKnown RBP5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 NGDNQ8NEJ9 315 aaKnown RBP5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 OR52L2PQ8NGH6 319 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 MYEOVQ96EZ4 313 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 TOX2Q96NM4 488 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 ARHGAP39Q9C0H5 1083 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 ZNF768Q9H5H4 540 aaKnown RBP5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 IL21RQ9HBE5 538 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 CD248Q9HCU0 757 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 GPR34Q9UPC5 381 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 KDM3AQ9Y4C1 1321 aa5.7□□□□□ -1.5
RAB3IP-213ENST00000550647 FAM90A7PA6NKC0 464 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 FAM90A22PA8MWA6 464 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 FAM90A12PA8MX19 464 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 FAM90A23PA8MXZ1 464 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 H3BNC9 293 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 ACP5P13686 325 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 CPA1P15085 419 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 DDX6P26196 483 aaKnown RBP eCLIP5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 ZFP36P26651 326 aaKnown RBP5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 EPHA8P29322 1005 aaPredicted RBP5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 GRK5P34947 590 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 EIF4A2Q14240 407 aaKnown RBP5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 SEC23BQ15437 767 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 CYP1B1Q16678 543 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 SNX30Q5VWJ9 437 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 HAUS3Q68CZ6 603 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 B4GALNT4Q76KP1 1039 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 LIMS2Q7Z4I7 341 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 ADSSL1Q8N142 457 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 OR8H2Q8N162 312 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 MYCBPAPQ8TBZ2 947 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 SSH3Q8TE77 659 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 LPIN2Q92539 896 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 FKBP10Q96AY3 582 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 PGBD1Q96JS3 809 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 TIGD1Q96MW7 591 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 WWC2-AS2Q96NR7 200 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 NUDT16L1Q9BRJ7 211 aaKnown RBP5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 XYLT2Q9H1B5 865 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 CDCP1Q9H5V8 836 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 STN1Q9H668 368 aaKnown RBP5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 ZNF703Q9H7S9 590 aaPredicted RBP5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 RMI1Q9H9A7 625 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 BEX4Q9NWD9 120 aaPredicted RBP5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 TRPC5Q9UL62 973 aaPredicted RBP5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 SUFUQ9UMX1 484 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 PCDHA10Q9Y5I2 948 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 ENTPD2Q9Y5L3 495 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 CECR2Q9BXF3 1484 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 ADGRA2Q96PE1 1338 aa5.69□□□□□ -1.5
RAB3IP-213ENST00000550647 TBC1D3DA0A087WVF3 549 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TBC1D3IA0A087WXS9 549 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TBC1D3EA0A087X179 549 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TBC1D3KA0A087X1G2 549 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TBC1D3BA6NDS4 549 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TBC1D3FA6NER0 549 aaPredicted RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TBC1D3LB9A6J9 549 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 PEX12O00623 359 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TCERG1O14776 1098 aaKnown RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 ANP32CO43423 234 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TMPRSS11DO60235 418 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 PTP4A3O75365 173 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 NXPH3O95157 252 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 PDHA1P08559 390 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 DLDP09622 509 aaKnown RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TBC1D3HP0C7X1 549 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 MYCLP12524 364 aaPredicted RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 ALOX12P18054 663 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TAS2R50P59544 299 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 SUMO2P61956 95 aaKnown RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 RPP30P78346 268 aaKnown RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 SETQ01105 290 aaPredicted RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 BFSP2Q13515 415 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 PTPRRQ15256 657 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 ANKRD40Q6AI12 368 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TBC1D3GQ6DHY5 549 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TBC1D3CQ6IPX1 549 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 WDR93Q6P2C0 686 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 PTCHD4Q6ZW05 846 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 GALNT5Q7Z7M9 940 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 CHD1LQ86WJ1 897 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 RPAP2Q8IXW5 612 aaPredicted RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TBC1D3Q8IZP1 549 aaPredicted RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 CPEB3Q8NE35 698 aaKnown RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 RP9Q8TA86 221 aaKnown RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 ARRDC3Q96B67 414 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 NSUN4Q96CB9 384 aaKnown RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 RBM17Q96I25 401 aaKnown RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 TEPSINQ96N21 525 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 LENG8Q96PV6 779 aaPredicted RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 PRR25Q96S07 402 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 RNF26Q9BY78 433 aaPredicted RBP5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 CCDC68Q9H2F9 335 aa5.68□□□□□ -1.5
RAB3IP-213ENST00000550647 GHITMQ9H3K2 345 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms