RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 TRIM66O15016 1216 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 VPS4BO75351 444 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 SCNN1BP51168 640 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 SKP1P63208 163 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 VPS33AQ96AX1 596 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 C1QTNF7Q9BXJ2 289 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 EHD4Q9H223 541 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 ARHGEF3Q9NR81 526 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 KBTBD4Q9NVX7 518 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 CYP39A1Q9NYL5 469 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 ACOT9Q9Y305 439 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 CCDC154A6NI56 674 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 TKTL1P51854 596 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 PKN1Q16512 942 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 FBXO28Q9NVF7 368 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 VTI1BQ9UEU0 232 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 RAD51BO15315 384 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 VIL1P09327 827 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 CRABP2P29373 138 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 TKTP29401 623 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 PPP1R14AQ96A00 147 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 ERI2A8K979 691 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 SERPINF2P08697 491 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 PTPN11Q06124 597 aaPredicted RBP12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 ITPK1Q13572 414 aa12.81□□□□□ -0.36
RAB3IP-212ENST00000550536 CNOT3O75175 753 aaKnown RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 DPEP1P16444 411 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 CYB5D1Q6P9G0 228 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 ACTR8Q9H981 624 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 PCDH9Q9HC56 1237 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 TMEM51Q9NW97 253 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 TRPC4Q9UBN4 977 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 SPANXN3Q5MJ09 141 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 ATAD3BQ5T9A4 648 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 CLYBLQ8N0X4 340 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 OR8H2Q8N162 312 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 MYCBPAPQ8TBZ2 947 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 OSBPL6Q9BZF3 934 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 MAPTP10636 758 aaKnown RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 POU1F1P28069 291 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 ALDH9A1P49189 494 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 SARSP49591 514 aaKnown RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 KCNMB4Q86W47 210 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 CENPTQ96BT3 561 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 SERHL2Q9H4I8 314 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 SERHLQ9NQF3 203 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 SHOC2Q9UQ13 582 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 CPSF4O95639 269 aaKnown RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 JAK1P23458 1154 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 NT5DC3Q86UY8 548 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 COLGALT1Q8NBJ5 622 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 GANQ9H2C0 597 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 SLC12A8A0AV02 714 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 FDPSP14324 419 aaKnown RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 PSMC6P62333 389 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 ELAVL2Q12926 359 aaKnown RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 LRRC34Q8IZ02 419 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 TCF7L2Q9NQB0 619 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 MYOM1P52179 1685 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 ABCB1P08183 1280 aaPredicted RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 CLTBP09497 229 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 HALP42357 657 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 ERVK-24P63145 666 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 CCDC157Q569K6 752 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 TMEM79Q9BSE2 394 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 CIPCQ9C0C6 399 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 TMBIM4Q9HC24 238 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 POLE3Q9NRF9 147 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 DUSP10Q9Y6W6 482 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 ENDOD1O94919 500 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 COX10Q12887 443 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 SGCGQ13326 291 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 CCNG2Q16589 344 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 GJC2Q5T442 439 aaPredicted RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 GLT6D1Q7Z4J2 308 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 TMEM132CQ8N3T6 1108 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 TMC2Q8TDI7 906 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 SPRTNQ9H040 489 aaPredicted RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 PABPC1P11940 636 aaKnown RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 MAGEA10P43363 369 aaPredicted RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 VAC14Q08AM6 782 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 SPOCD1Q6ZMY3 1216 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 PTAR1Q7Z6K3 402 aaPredicted RBP12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 CDK20Q8IZL9 346 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 TMEM159Q96B96 161 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 TPD52L3Q96J77 140 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 PIF1Q9H611 641 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 INTS13Q9NVM9 706 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 KLHL28Q9NXS3 571 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 VPS51Q9UID3 782 aa12.8□□□□□ -0.36
RAB3IP-212ENST00000550536 SAC3D1A6NKF1 404 aa12.79□□□□□ -0.36
RAB3IP-212ENST00000550536 CRYMQ14894 314 aa12.79□□□□□ -0.36
RAB3IP-212ENST00000550536 C2CD6Q53TS8 623 aa12.79□□□□□ -0.36
RAB3IP-212ENST00000550536 MTSS1LQ765P7 747 aa12.79□□□□□ -0.36
RAB3IP-212ENST00000550536 FAM131BQ86XD5 332 aa12.79□□□□□ -0.36
RAB3IP-212ENST00000550536 ZMYM2Q9UBW7 1377 aa12.79□□□□□ -0.36
RAB3IP-212ENST00000550536 EPHX2P34913 555 aa12.79□□□□□ -0.36
RAB3IP-212ENST00000550536 MARC1Q5VT66 337 aa12.79□□□□□ -0.36
RAB3IP-212ENST00000550536 SMIM5Q71RC9 77 aa12.79□□□□□ -0.36
RAB3IP-212ENST00000550536 VN1R5Q7Z5H4 357 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms