RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 USP38Q8NB14 1042 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 TXNDC5Q8NBS9 432 aaKnown RBP6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 RNF169Q8NCN4 708 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 WDR60Q8WVS4 1066 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 PPP2R3CQ969Q6 453 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 ZDHHC12Q96GR4 267 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 ABHD8Q96I13 439 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 SMOQ99835 787 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 BRD8Q9H0E9 1235 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 LMAN2LQ9H0V9 348 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 NDUFAF4Q9P032 175 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 KCND3Q9UK17 655 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 CNPY2Q9Y2B0 182 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 CYP46A1Q9Y6A2 500 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 LAMB2P55268 1798 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 KDM3BQ7LBC6 1761 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 ABCC12Q96J65 1359 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 WDR33Q9C0J8 1336 aaKnown RBP6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 DRGXA6NNA5 263 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 EFCAB8A8MWE9 144 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 DOK2O60496 412 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 TFRCP02786 760 aaKnown RBP6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 CSF1P09603 554 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 CHRM3P20309 590 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 SERPINA4P29622 427 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 EPHX2P34913 555 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 HOXD12P35452 270 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 CCT4P50991 539 aaKnown RBP6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 DRG2P55039 364 aaKnown RBP6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 MYO1EQ12965 1108 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 ERV3-1Q14264 604 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 RPS6KA2Q15349 733 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 HLFQ16534 295 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 TAF2Q6P1X5 1199 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 MED25Q71SY5 747 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 SYT13Q7L8C5 426 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 RALYLQ86SE5 291 aaKnown RBP6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 CNTROBQ8N137 903 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 LSMEM1Q8N8F7 131 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 PSD4Q8NDX1 1056 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 POC1BQ8TC44 478 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 CPT1BQ92523 772 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 ZNF512Q96ME7 567 aaPredicted RBP6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 FMNL2Q96PY5 1086 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 TRIB1Q96RU8 372 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 SDF4Q9BRK5 362 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 NUDT22Q9BRQ3 303 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 NSMCE4AQ9NXX6 385 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 NTMQ9P121 344 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 DNAJB11Q9UBS4 358 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 HACL1Q9UJ83 578 aa6.81□□□□□ -1.32
TGFBR1-208ENST00000550253 PI4KAP2A4QPH2 592 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 VWA3AA6NCI4 1184 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 C9orf118A6NHY6 69 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 CD3EAPO15446 510 aaKnown RBP6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 ZSCAN9O15535 394 aaPredicted RBP6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 RGS10O43665 173 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 SRGAP2O75044 1071 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 RPP40O75818 363 aaKnown RBP6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 POLD2P49005 469 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 PXNP49023 591 aaPredicted RBP6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 MCM2P49736 904 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 LOXL3P58215 753 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 PIGFQ07326 219 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 TEFQ10587 303 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 BAK1Q16611 211 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 DEFB115Q30KQ5 88 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 NRN1LQ496H8 165 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 GLIPR1L2Q4G1C9 344 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 CST9Q5W186 159 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 EFCAB12Q6NXP0 572 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 SLC30A10Q6XR72 485 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 PRR23BQ6ZRT6 265 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 FAM83AQ86UY5 434 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 NBPF5PQ86XG9 351 aaPredicted RBP6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 NSUN7Q8NE18 718 aaKnown RBP6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 SHCBP1Q8NEM2 672 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 ABHD5Q8WTS1 349 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 RNF125Q96EQ8 232 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 TTPALQ9BTX7 342 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 ACAD9Q9H845 621 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 NKIRAS2Q9NYR9 191 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 CDYLQ9Y232 598 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 MRPS17Q9Y2R5 130 aaKnown RBP6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 RAD54BQ9Y620 910 aa6.8□□□□□ -1.32
TGFBR1-208ENST00000550253 TAF1P21675 1872 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 SH3D21A4FU49 640 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 BTBD11A6QL63 1104 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 STX16-NPEPL1H3BU86 382 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 BIN1O00499 593 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 STX16O14662 325 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 SPTLC2O15270 562 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 PLOD3O60568 738 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 TIPRLO75663 272 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 CYP21A2P08686 494 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 ABCD3P28288 659 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 EPS15P42566 896 aa6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 MAGEA10P43363 369 aaPredicted RBP6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 GCLCP48506 637 aaPredicted RBP6.79□□□□□ -1.32
TGFBR1-208ENST00000550253 KCNC1P48547 511 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms