RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 SLC1A5Q15758 541 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 MDH1BQ5I0G3 518 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 GNASQ5JWF2 1037 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 ANKRD20A2Q5SQ80 823 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 ANKRD20A1Q5TYW2 823 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 ANKRD20A3Q5VUR7 823 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 WSCD1Q658N2 575 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 ICE2Q659A1 982 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 RGMBQ6NW40 437 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 LRRC8BQ6P9F7 803 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 TIFABQ6ZNK6 161 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 CLEC20AQ6ZU45 233 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 RFX8Q6ZV50 586 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 BNIPLQ7Z465 357 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 MRPL10Q7Z7H8 261 aaKnown RBP9.23□□□□□ -0.93
TMEM116-209ENST00000550020 FAM35AQ86V20 835 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 FAM131BQ86XD5 332 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 RASAL3Q86YV0 1011 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 IFNL1Q8IU54 200 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 CCDC185Q8N715 623 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 COLGALT1Q8NBJ5 622 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 DEPDC1BQ8WUY9 529 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 SIKE1Q9BRV8 207 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 TSSK1BQ9BXA7 367 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 UPF3AQ9H1J1 476 aaKnown RBP9.23□□□□□ -0.93
TMEM116-209ENST00000550020 RNF39Q9H2S5 420 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 FAM96AQ9H5X1 160 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 ARHGEF4Q9NR80 690 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 ABCF3Q9NUQ8 709 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 MTMR10Q9NXD2 777 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 FLRT1Q9NZU1 646 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 ST3GAL5Q9UNP4 418 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 RPL26L1Q9UNX3 145 aaKnown RBP9.23□□□□□ -0.93
TMEM116-209ENST00000550020 TTLL3Q9Y4R7 772 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 NME7Q9Y5B8 376 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 USP3Q9Y6I4 520 aa9.23□□□□□ -0.93
TMEM116-209ENST00000550020 TRIM49D1C9J1S8 452 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 IGF2BP3O00425 579 aaKnown RBP eCLIP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 IGHA2P01877 340 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 LTFP02788 710 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 POLBP06746 335 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 DHRS4L1P0CG22 281 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 RARBP10826 455 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 PYGBP11216 843 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 EZRP15311 586 aaKnown RBP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 GOT1P17174 413 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 ADRA1DP25100 572 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 TKTP29401 623 aaKnown RBP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 CCNFP41002 786 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 NEK3P51956 506 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 MAP3K7CLP57077 242 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 DAOAP59103 153 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 ELF3P78545 371 aaPredicted RBP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 GAD2Q05329 585 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 FAAP100Q0VG06 881 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 AP1B1Q10567 949 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 NME3Q13232 169 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 FRG1Q14331 258 aaKnown RBP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 EFTUD2Q15029 972 aaKnown RBP eCLIP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 RAB41Q5JT25 222 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 SPANXN3Q5MJ09 141 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 SWT1Q5T5J6 900 aaKnown RBP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 ARMC3Q5W041 872 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 STEAP4Q687X5 459 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 CASC4Q6P4E1 433 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 KYAT3Q6YP21 454 aaKnown RBP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 UNC5AQ6ZN44 842 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 MARK2Q7KZI7 788 aaKnown RBP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 SERINC5Q86VE9 423 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 CAND1Q86VP6 1230 aaKnown RBP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 OSTM1Q86WC4 334 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 ECHDC2Q86YB7 292 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 TMEM130Q8N3G9 435 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 CCNYQ8ND76 341 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 SMC1BQ8NDV3 1235 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 SLC7A14Q8TBB6 771 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 CLEC4CQ8WTT0 213 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 SREK1Q8WXA9 508 aaKnown RBP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 SIGLEC10Q96LC7 697 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 TMEM237Q96Q45 408 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 ACBD6Q9BR61 282 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 WDR83Q9BRX9 315 aaKnown RBP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 SENP6Q9GZR1 1112 aaPredicted RBP9.22□□□□□ -0.93
TMEM116-209ENST00000550020 KIF9Q9HAQ2 790 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 RRAGCQ9HB90 399 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 ARHGEF3Q9NR81 526 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 IGSF9Q9P2J2 1179 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 FBXW11Q9UKB1 542 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 GJD2Q9UKL4 321 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 GRID1Q9ULK0 1009 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 SQORQ9Y6N5 450 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 EVPLQ92817 2033 aa9.22□□□□□ -0.93
TMEM116-209ENST00000550020 CITO14578 2027 aa9.21□□□□□ -0.93
TMEM116-209ENST00000550020 ARL5CA6NH57 179 aa9.21□□□□□ -0.94
TMEM116-209ENST00000550020 FOXO6A8MYZ6 492 aa9.21□□□□□ -0.94
TMEM116-209ENST00000550020 CREB3O43889 395 aa9.21□□□□□ -0.94
TMEM116-209ENST00000550020 GLRA3O75311 464 aa9.21□□□□□ -0.94
TMEM116-209ENST00000550020 CABYRO75952 493 aa9.21□□□□□ -0.94
TMEM116-209ENST00000550020 WFS1O76024 890 aa9.21□□□□□ -0.94
TMEM116-209ENST00000550020 ALDH1A2O94788 518 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms