RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 RNF34Q969K3 372 aa20.12■□□□□ 0.81
DDX54-207ENST00000550016 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDX54-207ENST00000550016 SELENOOQ9BVL4 669 aa20.12■□□□□ 0.81
DDX54-207ENST00000550016 ZNHIT6Q9NWK9 470 aaKnown RBP20.12■□□□□ 0.81
DDX54-207ENST00000550016 COX16Q9P0S2 106 aa20.12■□□□□ 0.81
DDX54-207ENST00000550016 ADAMTS1Q9UHI8 967 aa20.12■□□□□ 0.81
DDX54-207ENST00000550016 SLC12A6Q9UHW9 1150 aa20.12■□□□□ 0.81
DDX54-207ENST00000550016 CACNA1IQ9P0X4 2223 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 SIGLEC16A6NMB1 481 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 NEDD8-MDP1E9PL57 170 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 MFAP3LO75121 409 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 F9P00740 461 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 CYBBP04839 570 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 TYRP14679 529 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 DRD1P21728 446 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 CCR1P32246 355 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 SLC6A11P48066 632 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 SULT1E1P49888 294 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 ADKP55263 362 aaKnown RBP20.11■□□□□ 0.81
DDX54-207ENST00000550016 PPP2R5DQ14738 602 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 TRNP1Q6NT89 227 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 WDR59Q6PJI9 974 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 ETFBKMTQ8IXQ9 262 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 NAT16Q8N8M0 369 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 ATP6V0D2Q8N8Y2 350 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 PGAP3Q96FM1 320 aaPredicted RBP20.11■□□□□ 0.81
DDX54-207ENST00000550016 BTN2A3PQ96KV6 586 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 PNKPQ96T60 521 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 DDX50Q9BQ39 737 aaKnown RBP20.11■□□□□ 0.81
DDX54-207ENST00000550016 IRX2Q9BZI1 471 aaPredicted RBP20.11■□□□□ 0.81
DDX54-207ENST00000550016 ISCUQ9H1K1 167 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 ARHGAP20Q9P2F6 1191 aa20.11■□□□□ 0.81
DDX54-207ENST00000550016 TCRBV5S1A1TA0A578 114 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 KCNU1A8MYU2 1149 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.1■□□□□ 0.81
DDX54-207ENST00000550016 AKR1B15C9JRZ8 316 aaPredicted RBP20.1■□□□□ 0.81
DDX54-207ENST00000550016 CACNG3O60359 315 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 PENKP01210 267 aaPredicted RBP20.1■□□□□ 0.81
DDX54-207ENST00000550016 PDGFRAP16234 1089 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 TFE3P19532 575 aaPredicted RBP20.1■□□□□ 0.81
DDX54-207ENST00000550016 NUBP1P53384 320 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 MTA1Q13330 715 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 CCINQ13939 588 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 MPPE1Q53F39 396 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 OTUD1Q5VV17 481 aaPredicted RBP20.1■□□□□ 0.81
DDX54-207ENST00000550016 DNAJC24Q6P3W2 148 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 SND1Q7KZF4 910 aaKnown RBP eCLIP20.1■□□□□ 0.81
DDX54-207ENST00000550016 C12orf40Q86WS4 652 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 CNGA4Q8IV77 575 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 SYNPOQ8N3V7 929 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 EMC1Q8N766 993 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 DTWD2Q8NBA8 298 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 JOSD2Q8TAC2 188 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 RXFP2Q8WXD0 754 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 XPO6Q96QU8 1125 aaKnown RBP20.1■□□□□ 0.81
DDX54-207ENST00000550016 TBCBQ99426 244 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 ADAM33Q9BZ11 813 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 ABHD10Q9NUJ1 306 aa20.1■□□□□ 0.81
DDX54-207ENST00000550016 A0A087X0T9 212 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 GOLGA6L7A0A1B0GV03 622 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 C2CD4BA6NLJ0 364 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 GFRA2O00451 464 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 TSPAN3O60637 253 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 TULP3O75386 442 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 GJB6O95452 261 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 MOCS2O96007 188 aaPredicted RBP20.09■□□□□ 0.81
DDX54-207ENST00000550016 EGFP01133 1207 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 FAM228BP0C875 321 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 ABCB4P21439 1286 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 RRM1P23921 792 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 RFC1P35251 1148 aaPredicted RBP20.09■□□□□ 0.81
DDX54-207ENST00000550016 EIF4A3P38919 411 aaKnown RBP20.09■□□□□ 0.81
DDX54-207ENST00000550016 CXCR3P49682 368 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 DEUP1Q05D60 604 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 PREPLQ4J6C6 727 aaPredicted RBP20.09■□□□□ 0.81
DDX54-207ENST00000550016 FAM133BQ5BKY9 247 aaKnown RBP20.09■□□□□ 0.81
DDX54-207ENST00000550016 FYB2Q5VWT5 728 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 NADSYN1Q6IA69 706 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 DDI1Q8WTU0 396 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 BHMTQ93088 406 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 TMA16Q96EY4 203 aaKnown RBP20.09■□□□□ 0.81
DDX54-207ENST00000550016 CFAP57Q96MR6 1250 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 RBM12Q9NTZ6 932 aaKnown RBP20.09■□□□□ 0.81
DDX54-207ENST00000550016 PIGVQ9NUD9 493 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 PLK2Q9NYY3 685 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 CALCOCO1Q9P1Z2 691 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 DEC1Q9P2X7 70 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 PAXBP1Q9Y5B6 917 aa20.09■□□□□ 0.81
DDX54-207ENST00000550016 A0A0A0MRY4 1105 aa20.08■□□□□ 0.81
DDX54-207ENST00000550016 ANKRD62A6NC57 917 aa20.08■□□□□ 0.81
DDX54-207ENST00000550016 ENDOD1O94919 500 aa20.08■□□□□ 0.81
DDX54-207ENST00000550016 APODP05090 189 aa20.08■□□□□ 0.81
DDX54-207ENST00000550016 SDC4P31431 198 aa20.08■□□□□ 0.81
DDX54-207ENST00000550016 SLC6A4P31645 630 aa20.08■□□□□ 0.81
DDX54-207ENST00000550016 PTPN9P43378 593 aa20.08■□□□□ 0.81
DDX54-207ENST00000550016 CCDC14Q49A88 953 aa20.08■□□□□ 0.81
DDX54-207ENST00000550016 FBXO43Q4G163 708 aa20.08■□□□□ 0.81
DDX54-207ENST00000550016 BRMS1LQ5PSV4 323 aa20.08■□□□□ 0.81
DDX54-207ENST00000550016 PPP1R15BQ5SWA1 713 aa20.08■□□□□ 0.81
DDX54-207ENST00000550016 PIK3R6Q5UE93 754 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms