RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 HPSEQ9Y251 543 aa14.21□□□□□ -0.13
TROAP-211ENST00000549891 FREM2Q5SZK8 3169 aa14.21□□□□□ -0.14
TROAP-211ENST00000549891 ADAMTS20P59510 1910 aa14.21□□□□□ -0.14
TROAP-211ENST00000549891 PLXNB3Q9ULL4 1909 aa14.21□□□□□ -0.14
TROAP-211ENST00000549891 ANKRD11Q6UB99 2663 aaPredicted RBP14.2□□□□□ -0.14
TROAP-211ENST00000549891 ZBED1O96006 694 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 MXI1P50539 228 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 TKTL1P51854 596 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 COPAP53621 1224 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 PDE4CQ08493 712 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 SLC4A11Q8NBS3 891 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 OR2T3Q8NH03 318 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 P2RY11Q96G91 374 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 SPATA32Q96LK8 384 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 GAREM1Q9H706 876 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 FBRSQ9HAH7 460 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 TM7SF3Q9NS93 570 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 RAB20Q9NX57 234 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 EIF2B4Q9UI10 523 aaKnown RBP14.2□□□□□ -0.14
TROAP-211ENST00000549891 PCOLCE2Q9UKZ9 415 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 PLA2G4CQ9UP65 541 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 MAPK8IP1Q9UQF2 711 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 ZFYVE26Q68DK2 2539 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 BAHCC1Q9P281 2608 aa14.2□□□□□ -0.14
TROAP-211ENST00000549891 TMEM131Q92545 1883 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 CBFA2T3O75081 653 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 EPB41P11171 864 aaKnown RBP14.19□□□□□ -0.14
TROAP-211ENST00000549891 PRKCHP24723 683 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 AFF3P51826 1226 aaKnown RBP14.19□□□□□ -0.14
TROAP-211ENST00000549891 BCAT1P54687 386 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 RAD23BP54727 409 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 KRT85P78386 507 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 SCAPQ12770 1279 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 COL9A2Q14055 689 aaPredicted RBP14.19□□□□□ -0.14
TROAP-211ENST00000549891 SUZ12Q15022 739 aaKnown RBP14.19□□□□□ -0.14
TROAP-211ENST00000549891 TRIP4Q15650 581 aaPredicted RBP14.19□□□□□ -0.14
TROAP-211ENST00000549891 EDRF1Q3B7T1 1238 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 PM20D1Q6GTS8 502 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 WFIKKN2Q8TEU8 576 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 RNF139Q8WU17 664 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 CCDC34Q96HJ3 373 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 IPO9Q96P70 1041 aaKnown RBP14.19□□□□□ -0.14
TROAP-211ENST00000549891 CDC6Q99741 560 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 CCDC86Q9H6F5 360 aaKnown RBP14.19□□□□□ -0.14
TROAP-211ENST00000549891 LRRC4Q9HBW1 653 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 KIAA1522Q9P206 1035 aaPredicted RBP14.19□□□□□ -0.14
TROAP-211ENST00000549891 HESX1Q9UBX0 185 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 HBS1LQ9Y450 684 aaKnown RBP14.19□□□□□ -0.14
TROAP-211ENST00000549891 PCDHGB2Q9Y5G2 931 aa14.19□□□□□ -0.14
TROAP-211ENST00000549891 XPO1O14980 1071 aaKnown RBP14.18□□□□□ -0.14
TROAP-211ENST00000549891 FLRT2O43155 660 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 LATS1O95835 1130 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 CAPNS1P04632 268 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 PRR29P0C7W0 189 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 HOXD9P28356 352 aaPredicted RBP14.18□□□□□ -0.14
TROAP-211ENST00000549891 MCCD1P59942 119 aaPredicted RBP14.18□□□□□ -0.14
TROAP-211ENST00000549891 YWHAEP62258 255 aaKnown RBP14.18□□□□□ -0.14
TROAP-211ENST00000549891 ZBTB16Q05516 673 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 DPYDQ12882 1025 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 CAMK2GQ13555 558 aaPredicted RBP14.18□□□□□ -0.14
TROAP-211ENST00000549891 PKP1Q13835 747 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 TEAD4Q15561 434 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 HLA-BQ31612 363 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 FNDC3BQ53EP0 1204 aaKnown RBP14.18□□□□□ -0.14
TROAP-211ENST00000549891 CCNI2Q6ZMN8 369 aaPredicted RBP14.18□□□□□ -0.14
TROAP-211ENST00000549891 CACUL1Q86Y37 369 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 FMNL3Q8IVF7 1028 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 PNPLA1Q8N8W4 532 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 RBBP8NLQ8NC74 664 aaPredicted RBP14.18□□□□□ -0.14
TROAP-211ENST00000549891 SORCS1Q8WY21 1168 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 SNX19Q92543 992 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 SEMA4DQ92854 862 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 ARID3AQ99856 593 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 LHX5Q9H2C1 402 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 CLEC4EQ9ULY5 219 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 NUMA1Q14980 2115 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 TP53BP1Q12888 1972 aaPredicted RBP14.18□□□□□ -0.14
TROAP-211ENST00000549891 NBEAQ8NFP9 2946 aa14.18□□□□□ -0.14
TROAP-211ENST00000549891 MUC22E2RYF6 1773 aaPredicted RBP14.17□□□□□ -0.14
TROAP-211ENST00000549891 CABIN1Q9Y6J0 2220 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 FAM237AA0A1B0GTK4 181 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 TAF4O00268 1085 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 CETN3O15182 167 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 ATP5BP06576 529 aaKnown RBP14.17□□□□□ -0.14
TROAP-211ENST00000549891 NDUFA8P51970 172 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 BST2Q10589 180 aaKnown RBP14.17□□□□□ -0.14
TROAP-211ENST00000549891 GOLGA7BQ2TAP0 167 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 ZCWPW2Q504Y3 356 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 SGO2Q562F6 1265 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 ADGRF1Q5T601 910 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 TMEM215Q68D42 235 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 FAM124AQ86V42 546 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 AHI1Q8N157 1196 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 ZNF557Q8N988 423 aaPredicted RBP14.17□□□□□ -0.14
TROAP-211ENST00000549891 ENGASEQ8NFI3 743 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 TMA16Q96EY4 203 aaKnown RBP14.17□□□□□ -0.14
TROAP-211ENST00000549891 IRX2Q9BZI1 471 aaPredicted RBP14.17□□□□□ -0.14
TROAP-211ENST00000549891 ULBP1Q9BZM6 244 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 TMEM245Q9H330 911 aa14.17□□□□□ -0.14
TROAP-211ENST00000549891 IL21RQ9HBE5 538 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms