RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PCNX2A6NKB5 2137 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 PPP1R3GB7ZBB8 358 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 KRT37O76014 449 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 SERPINF2P08697 491 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 CEACAM1P13688 526 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 PRKCHP24723 683 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 HARS2P49590 506 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 RGS7P49802 495 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 ZNF132P52740 706 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 ZNF234Q14588 700 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 PMF1Q6P1K2 205 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 MSANTD2Q6P1R3 559 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 RABEPKQ7Z6M1 372 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 METTL3Q86U44 580 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 PPM1KQ8N3J5 372 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 DEFB124Q8NES8 71 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 RNF139Q8WU17 664 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 SLC35F5Q8WV83 523 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 UCMAQ8WVF2 138 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 NELFBQ8WX92 580 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 SORCS1Q8WY21 1168 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 ABCC13Q9NSE7 274 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 ELOVL2Q9NXB9 296 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 SLC6A14Q9UN76 642 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 WASF3Q9UPY6 502 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 CTNND2Q9UQB3 1225 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 PCDHB4Q9Y5E5 795 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 IGF2RP11717 2491 aa18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 NYNRINQ9P2P1 1898 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-205ENST00000548650 M0QYV0 167 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 RNF225M0QZC1 329 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 P4HA2O15460 535 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 LATS1O95835 1130 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 CALCAP01258 141 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 IGLV3-27P01718 113 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 LCP1P13796 627 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 BRD2P25440 801 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 HLA-FP30511 346 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 ZNF445P59923 1031 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 MORC3Q14149 939 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 MPPE1Q53F39 396 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 ARHGEF19Q8IW93 802 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 IRGQQ8WZA9 623 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 ZNF419Q96HQ0 510 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 CIPCQ9C0C6 399 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 PRDM16Q9HAZ2 1276 aa18.15■□□□□ 0.5
CHMP1A-205ENST00000548650 PIK3R2O00459 728 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 TSPAN3O60637 253 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 NCAM1P13591 858 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 CD6P30203 668 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 SGSHP51688 502 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 COPAP53621 1224 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 GCNT1Q02742 428 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 GFPT1Q06210 699 aaPredicted RBP18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 SEMA3BQ13214 749 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 CNGA2Q16280 664 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 PIP4P1Q86T03 277 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 TRIM59Q8IWR1 403 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 CLEC4CQ8WTT0 213 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 GTPBP2Q9BX10 602 aaKnown RBP18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 NUMA1Q14980 2115 aa18.14■□□□□ 0.49
CHMP1A-205ENST00000548650 BICDL2A1A5D9 508 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 UPK3BL1B0FP48 263 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 KCNJ18B7U540 433 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 UPK3BL2E5RIL1 263 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 SYNCRIPO60506 623 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 NDUFS2O75306 463 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 IGLV3-19P01714 112 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 MARSP56192 900 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 FOXC1Q12948 553 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 STILQ15468 1287 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 ADGRF1Q5T601 910 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 SERPINA13PQ6UXR4 307 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 RRAGAQ7L523 313 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 CACUL1Q86Y37 369 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 MINDY1Q8N5J2 469 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 OR2I1PQ8NGU4 316 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 FOXJ1Q92949 421 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 TOE1Q96GM8 510 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 KREMEN1Q96MU8 473 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 ITM2CQ9NQX7 267 aa18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 WSB2Q9NYS7 404 aaPredicted RBP18.13■□□□□ 0.49
CHMP1A-205ENST00000548650 BIN1O00499 593 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 ARHGAP33O14559 1287 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 LTFP02788 710 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 EPHX1P07099 455 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 TPMTP51580 245 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 ATXN3P54252 364 aaPredicted RBP18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 CETN1Q12798 172 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 E2F5Q15329 346 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 FAM133BQ5BKY9 247 aaKnown RBP18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 TMPRSS6Q8IU80 811 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 WFDC5Q8TCV5 224 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 WFIKKN2Q8TEU8 576 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 SIPA1Q96FS4 1042 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 ABCB8Q9NUT2 735 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 SUSD2Q9UGT4 822 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 GGA2Q9UJY4 613 aa18.12■□□□□ 0.49
CHMP1A-205ENST00000548650 TIMM44O43615 452 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms