RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 NUMBP49757 651 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 PHEXP78562 749 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 SNAPC2Q13487 334 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 ZC3H12AQ5D1E8 599 aaKnown RBP9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 SLC39A4Q6P5W5 647 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 BNC2Q6ZN30 1099 aaPredicted RBP9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 STRA8Q7Z7C7 330 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 COLGALT1Q8NBJ5 622 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 TFAP2BQ92481 460 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 RNF157Q96PX1 679 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 CPXM1Q96SM3 734 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 MIPEPQ99797 713 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 GRIP2Q9C0E4 1043 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 RRAGCQ9HB90 399 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 TCF7L2Q9NQB0 619 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 PNPOQ9NVS9 261 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 KLK14Q9P0G3 267 aa9.77□□□□□ -0.85
CALCOCO1-210ENST00000548263 ATRNL1Q5VV63 1379 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 SRGAP2BP0DMP2 458 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 GM2AP17900 193 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 SOX11P35716 441 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 ADCYAP1R1P41586 468 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 SLC18A1P54219 525 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 TMEM259Q4ZIN3 620 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 DCAF6Q58WW2 860 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 MPZL3Q6UWV2 235 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 LCA5Q86VQ0 697 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 SNX32Q86XE0 403 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 NETO2Q8NC67 525 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 SLC35B2Q8TB61 432 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 PRR11Q96HE9 360 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 COPS7BQ9H9Q2 264 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 SSU72Q9NP77 194 aaKnown RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 XPNPEP1Q9NQW7 623 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 SLC7A8Q9UHI5 535 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 TSPAN16Q9UKR8 245 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 ZNF214Q9UL59 606 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 F8W8V4 182 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 TPP1O14773 563 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 MAGEC1O60732 1142 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 VNN1O95497 513 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 BPGMP07738 259 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 ZBTB48P10074 688 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 TGM2P21980 687 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 OGDHQ02218 1023 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 LAMTOR4Q0VGL1 99 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 TAF1CQ15572 869 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 OASLQ15646 514 aaKnown RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 RALGPS1Q5JS13 557 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 C4orf22Q6V702 233 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 KYAT3Q6YP21 454 aaKnown RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 FASTKD5Q7L8L6 764 aaKnown RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 ENDOVQ8N8Q3 282 aaKnown RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 KYQ8NBH2 561 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 RNF217Q8TC41 542 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 EBF4Q9BQW3 602 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 UNKQ9C0B0 810 aaKnown RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 SYNPO2Q9UMS6 1093 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 SSX2IPQ9Y2D8 614 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 HBS1LQ9Y450 684 aaKnown RBP9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 AKAP10O43572 662 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 TPST1O60507 370 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 USP12O75317 370 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 IL18RAPO95256 599 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 ERVK-10P10266 1014 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 GNAZP19086 355 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 SULT1E1P49888 294 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 NDST1P52848 882 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 PEX6Q13608 980 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 CHSY1Q86X52 802 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 HPS6Q86YV9 775 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 TNS4Q8IZW8 715 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 NAT8LQ8N9F0 302 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 USP33Q8TEY7 942 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 DCAKDQ8WVC6 231 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 TUBGCP5Q96RT8 1024 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 EFCAB1Q9HAE3 211 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 ARHGAP28Q9P2N2 729 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 AP4E1Q9UPM8 1137 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 CDYLQ9Y232 598 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 THSD7AQ9UPZ6 1657 aa9.76□□□□□ -0.85
CALCOCO1-210ENST00000548263 CCDC189A1A4V9 331 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 PDHXO00330 501 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 PEX1O43933 1283 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 UGT1A9O60656 530 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 FAM200BP0CF97 657 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 TSHRP16473 764 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 PSMC3P17980 439 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 TFE3P19532 575 aaPredicted RBP9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 AVPR1AP37288 418 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 KPNA2P52292 529 aaKnown RBP9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 CHN2P52757 468 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 RTP1P59025 263 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 SP2Q02086 613 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 WASHC5Q12768 1159 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 USP4Q13107 963 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 PLEKHG4Q58EX7 1191 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 IL31Q6EBC2 164 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 ZPBP2Q6X784 338 aa9.75□□□□□ -0.85
CALCOCO1-210ENST00000548263 TDRD5Q8NAT2 981 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms