RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	SSH2	Q76I76	1423 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	AKAP12	Q02952	1782 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211		B4DGG1	531 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	EXOC5	O00471	708 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	CD3EAP	O15446	510 aa	Known RBP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	SMAD6	O43541	496 aa	Known RBP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	CNOT3	O75175	753 aa	Known RBP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	EN2	P19622	333 aa	Predicted RBP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	SLC7A1	P30825	629 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	MTX1	Q13505	466 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	ERV3-1	Q14264	604 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	CC2D1B	Q5T0F9	858 aa	Known RBP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	NPNT	Q6UXI9	565 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	MICU3	Q86XE3	530 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	PELI3	Q8N2H9	469 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	C11orf44	Q8N8P7	122 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	ZBTB34	Q8NCN2	500 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	NGDN	Q8NEJ9	315 aa	Known RBP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	EDC3	Q96F86	508 aa	Known RBP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	ZFYVE19	Q96K21	471 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	TAAR9	Q96RI9	348 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	FAM234A	Q9H0X4	552 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	A1CF	Q9NQ94	594 aa	Known RBP	4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	ZBTB40	Q9NUA8	1239 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	WWOX	Q9NZC7	414 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	CPNE7	Q9UBL6	633 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	HS3ST3B1	Q9Y662	390 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	KAT6B	Q8WYB5	2073 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	ITSN1	Q15811	1721 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	SHANK3	Q9BYB0	1731 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	CRYBG1	Q9Y4K1	1723 aa		4.41	□□□□□ -1.7
RPAP3-205	ENST00000548211	NOTCH4	Q99466	2003 aa		4.4	□□□□□ -1.7
RPAP3-205	ENST00000548211		M0R3H8	397 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	FYB1	O15117	783 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	PHGDH	O43175	533 aa	Known RBP	4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	RRP9	O43818	475 aa	Known RBP	4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	TMPRSS11D	O60235	418 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	TNFRSF1B	P20333	461 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	HMGB2	P26583	209 aa	Known RBP	4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	PTDSS1	P48651	473 aa	Known RBP	4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	MTHFS	P49914	203 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	GATM	P50440	423 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	PRELP	P51888	382 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	AGFG1	P52594	562 aa	Known RBP	4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	RPS13	P62277	151 aa	Known RBP	4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	CFHR3	Q02985	330 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	NPY5R	Q15761	445 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	ZNF549	Q6P9A3	640 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	VSTM1	Q6UX27	236 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	OVCH2	Q7RTZ1	564 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	PIM3	Q86V86	326 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	ARFGAP1	Q8N6T3	406 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	SMRP1	Q8NCR6	262 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	JPH3	Q8WXH2	748 aa	Predicted RBP	4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	SPSB4	Q96A44	273 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	LYZL4	Q96KX0	146 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	PPP1R9B	Q96SB3	815 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	B3GNT5	Q9BYG0	378 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	ZNF518B	Q9C0D4	1074 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	HIPK2	Q9H2X6	1198 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	MLXIPL	Q9NP71	852 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	GAR1	Q9NY12	217 aa	Known RBP	4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	ATP7B	P35670	1465 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	PLEKHH1	Q9ULM0	1364 aa		4.4	□□□□□ -1.71
RPAP3-205	ENST00000548211	PHRF1	Q9P1Y6	1649 aa	Known RBP	4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	BCL9	O00512	1426 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	TOPAZ1	Q8N9V7	1692 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	PEAK1	Q9H792	1746 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	PYCARD-AS1	I3L0S3	204 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	FGF2	P09038	288 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	NTSR1	P30989	418 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	PGD	P52209	483 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	SUMO3	P55854	103 aa	Predicted RBP	4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	MCL1	Q07820	350 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	STIM1	Q13586	685 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	SEMA3A	Q14563	771 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	SLC9C1	Q4G0N8	1177 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	ANO6	Q4KMQ2	910 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	ANO7	Q6IWH7	933 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	CHPF	Q8IZ52	775 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	C12orf76	Q8N812	135 aa	Predicted RBP	4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	SPATA3	Q8NHX4	192 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	GPATCH3	Q96I76	525 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	SCNM1	Q9BWG6	230 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	STK31	Q9BXU1	1019 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	USP29	Q9HBJ7	922 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	NMRK2	Q9NPI5	230 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	SACM1L	Q9NTJ5	587 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	RIMKLB	Q9ULI2	386 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	CPD	O75976	1380 aa		4.39	□□□□□ -1.71
RPAP3-205	ENST00000548211	PIK3C2G	O75747	1445 aa		4.38	□□□□□ -1.71
RPAP3-205	ENST00000548211	CRB1	P82279	1406 aa		4.38	□□□□□ -1.71
RPAP3-205	ENST00000548211	ATP10D	Q9P241	1426 aa		4.38	□□□□□ -1.71
RPAP3-205	ENST00000548211	UTRN	P46939	3433 aa		4.38	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms