RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 CETN1Q12798 172 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 PAK1Q13153 545 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 ZNF234Q14588 700 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 UAP1L1Q3KQV9 507 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 MPPE1Q53F39 396 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 ADGRF1Q5T601 910 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 MSANTD2Q6P1R3 559 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 KIAA1324Q6UXG2 1013 aaKnown RBP13.92□□□□□ -0.18
CPSF6-204ENST00000547486 ANKS1BQ7Z6G8 1248 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 SCUBE3Q8IX30 993 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 TRIML1Q8N9V2 468 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 IRGQQ8WZA9 623 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 TMA16Q96EY4 203 aaKnown RBP13.92□□□□□ -0.18
CPSF6-204ENST00000547486 ZNF419Q96HQ0 510 aaPredicted RBP13.92□□□□□ -0.18
CPSF6-204ENST00000547486 MED15Q96RN5 788 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 NUSAP1Q9BXS6 441 aaKnown RBP13.92□□□□□ -0.18
CPSF6-204ENST00000547486 CIPCQ9C0C6 399 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 MIS12Q9H081 205 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 INTS2Q9H0H0 1204 aaKnown RBP13.92□□□□□ -0.18
CPSF6-204ENST00000547486 PRDM16Q9HAZ2 1276 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 ITM2CQ9NQX7 267 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 SLC6A14Q9UN76 642 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 CNTN6Q9UQ52 1028 aa13.92□□□□□ -0.18
CPSF6-204ENST00000547486 NPC1O15118 1278 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 IGLV3-27P01718 113 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 AFPP02771 609 aaKnown RBP13.91□□□□□ -0.18
CPSF6-204ENST00000547486 CFIP05156 583 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 NCAM1P13591 858 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 SLC6A4P31645 630 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 GPD2P43304 727 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 RPL34P49207 117 aaKnown RBP13.91□□□□□ -0.18
CPSF6-204ENST00000547486 COPAP53621 1224 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 LMAN2Q12907 356 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 STARD3Q14849 445 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 DUOXA1Q1HG43 343 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 DENND1BQ6P3S1 775 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 RFWD3Q6PCD5 774 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 METTL3Q86U44 580 aaKnown RBP13.91□□□□□ -0.18
CPSF6-204ENST00000547486 ADIPOR2Q86V24 386 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 TMPRSS6Q8IU80 811 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 HSFY1Q96LI6 401 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 HSPA12BQ96MM6 686 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 CAPN10Q9HC96 672 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 UBE2TQ9NPD8 197 aaPredicted RBP13.91□□□□□ -0.18
CPSF6-204ENST00000547486 ACP6Q9NPH0 428 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 USP36Q9P275 1121 aaKnown RBP13.91□□□□□ -0.18
CPSF6-204ENST00000547486 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.91□□□□□ -0.18
CPSF6-204ENST00000547486 NUP205Q92621 2012 aa13.91□□□□□ -0.18
CPSF6-204ENST00000547486 CNOT1A5YKK6 2376 aaKnown RBP13.9□□□□□ -0.18
CPSF6-204ENST00000547486 GON4LQ3T8J9 2241 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 TIMM44O43615 452 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 NDUFS2O75306 463 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 LATS1O95835 1130 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 GNA14O95837 355 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 LTFP02788 710 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 SERPINF2P08697 491 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 HLA-EP13747 358 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 CSRP1P21291 193 aaKnown RBP13.9□□□□□ -0.18
CPSF6-204ENST00000547486 MAOBP27338 520 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 CD6P30203 668 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 HOXD12P35452 270 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 DPP6P42658 865 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 SHC2P98077 582 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 APBA1Q02410 837 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 EIF4HQ15056 248 aaKnown RBP13.9□□□□□ -0.18
CPSF6-204ENST00000547486 STILQ15468 1287 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 CAMK4Q16566 473 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 FAM133BQ5BKY9 247 aaKnown RBP13.9□□□□□ -0.18
CPSF6-204ENST00000547486 GJB7Q6PEY0 223 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 KIAA0907Q7Z7F0 614 aaPredicted RBP13.9□□□□□ -0.18
CPSF6-204ENST00000547486 OR2I1PQ8NGU4 316 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 CEP76Q8TAP6 659 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 WFDC5Q8TCV5 224 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 CYB5D2Q8WUJ1 264 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 UCMAQ8WVF2 138 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 MYEOVQ96EZ4 313 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 TOE1Q96GM8 510 aaKnown RBP13.9□□□□□ -0.18
CPSF6-204ENST00000547486 WSB2Q9NYS7 404 aaPredicted RBP13.9□□□□□ -0.18
CPSF6-204ENST00000547486 CYTH4Q9UIA0 394 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 ANGPTL2Q9UKU9 493 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 NAALADL1Q9UQQ1 740 aa13.9□□□□□ -0.18
CPSF6-204ENST00000547486 SYNCRIPO60506 623 aaKnown RBP13.89□□□□□ -0.19
CPSF6-204ENST00000547486 EPHX1P07099 455 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 KRT5P13647 590 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 CEACAM1P13688 526 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 TPMTP51580 245 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 TBX4P57082 545 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 PTPRNQ16849 979 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 PIK3R6Q5UE93 754 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 SYPL2Q5VXT5 272 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 NADSYN1Q6IA69 706 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 SERPINA13PQ6UXR4 307 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 ZNF366Q8N895 744 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 DEFB124Q8NES8 71 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 SIPA1Q96FS4 1042 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 LMLNQ96KR4 655 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 FCRL2Q96LA5 508 aaPredicted RBP13.89□□□□□ -0.19
CPSF6-204ENST00000547486 CRACR2AQ9BSW2 395 aa13.89□□□□□ -0.19
CPSF6-204ENST00000547486 GTPBP2Q9BX10 602 aaKnown RBP13.89□□□□□ -0.19
CPSF6-204ENST00000547486 TMEM245Q9H330 911 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms