RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 POLR3BQ9NW08 1133 aaPredicted RBP16.54■□□□□ 0.24
DDX54-204ENST00000546898 NCDNQ9UBB6 729 aa16.54■□□□□ 0.24
DDX54-204ENST00000546898 ANTXRLA6NF34 631 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 SGK1O00141 431 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 ACSL4O60488 711 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 RPP40O75818 363 aaKnown RBP16.53■□□□□ 0.24
DDX54-204ENST00000546898 ALDH1A2O94788 518 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 IGLV3-25P01717 112 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 ERBB2P04626 1255 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 HOXD9P28356 352 aaPredicted RBP16.53■□□□□ 0.24
DDX54-204ENST00000546898 HOXC13P31276 330 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 SOX5P35711 763 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 PXNP49023 591 aaPredicted RBP16.53■□□□□ 0.24
DDX54-204ENST00000546898 UBXN1Q04323 297 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 EMC10Q5UCC4 262 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 SYPL2Q5VXT5 272 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 OR6B2Q6IFH4 312 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 OLFML1Q6UWY5 402 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 PRR23BQ6ZRT6 265 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 FAM183BPQ6ZVS7 135 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 CEP68Q76N32 757 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 SLC26A9Q7LBE3 791 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 ANKS1BQ7Z6G8 1248 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 NOP9Q86U38 636 aaKnown RBP16.53■□□□□ 0.24
DDX54-204ENST00000546898 ZNF557Q8N988 423 aaPredicted RBP16.53■□□□□ 0.24
DDX54-204ENST00000546898 MSANTD4Q8NCY6 345 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 ZNF397Q8NF99 534 aaPredicted RBP16.53■□□□□ 0.24
DDX54-204ENST00000546898 DDX1Q92499 740 aaKnown RBP16.53■□□□□ 0.24
DDX54-204ENST00000546898 PCMTD1Q96MG8 357 aaPredicted RBP16.53■□□□□ 0.24
DDX54-204ENST00000546898 SLC2A13Q96QE2 648 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 HINFPQ9BQA5 517 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 FUCA2Q9BTY2 467 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 GMEB2Q9UKD1 530 aa16.53■□□□□ 0.24
DDX54-204ENST00000546898 CKAP5Q14008 2032 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 PRRT4C9JH25 899 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 NPC1O15118 1278 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 ADAM23O75077 832 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 DAB1O75553 588 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 TRUB2O95900 331 aaKnown RBP16.52■□□□□ 0.24
DDX54-204ENST00000546898 APOEP02649 317 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 ATP1A3P13637 1013 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 NTSR1P30989 418 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 SCNN1AP37088 669 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 STAT1P42224 750 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 ZNF165P49910 485 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 CDK17Q00537 523 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 SLC6A3Q01959 620 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 SRSF5Q13243 272 aaKnown RBP16.52■□□□□ 0.24
DDX54-204ENST00000546898 EIF4HQ15056 248 aaKnown RBP16.52■□□□□ 0.24
DDX54-204ENST00000546898 DCAF6Q58WW2 860 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 FAM133BQ5BKY9 247 aaKnown RBP16.52■□□□□ 0.24
DDX54-204ENST00000546898 MPP7Q5T2T1 576 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 TAF3Q5VWG9 929 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 EGFLAMQ63HQ2 1017 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 TMEM92Q6UXU6 159 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 DHX40Q8IX18 779 aaKnown RBP16.52■□□□□ 0.24
DDX54-204ENST00000546898 ADAM32Q8TC27 787 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 UCMAQ8WVF2 138 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 TMA16Q96EY4 203 aaKnown RBP16.52■□□□□ 0.24
DDX54-204ENST00000546898 NLRC4Q9NPP4 1024 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 WDR87Q6ZQQ6 2873 aa16.52■□□□□ 0.24
DDX54-204ENST00000546898 MUC22E2RYF6 1773 aaPredicted RBP16.51■□□□□ 0.23
DDX54-204ENST00000546898 TYW5A2RUC4 315 aaKnown RBP16.51■□□□□ 0.23
DDX54-204ENST00000546898 EPHB6O15197 1021 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 TSPAN3O60637 253 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 GFPT2O94808 682 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 HOXB2P14652 356 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 HNRNPLP14866 589 aaKnown RBP eCLIP16.51■□□□□ 0.23
DDX54-204ENST00000546898 GBP1P32455 592 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 GABRB2P47870 512 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 EIF4EBP2Q13542 120 aaPredicted RBP16.51■□□□□ 0.23
DDX54-204ENST00000546898 TAF5Q15542 800 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 RNF43Q68DV7 783 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 SDE2Q6IQ49 451 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 ANO7Q6IWH7 933 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 CACNA2D4Q7Z3S7 1137 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.51■□□□□ 0.23
DDX54-204ENST00000546898 C11orf74Q86VG3 221 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 CHPFQ8IZ52 775 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 DEFB106AQ8N104 65 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 GPR161Q8N6U8 529 aaKnown RBP16.51■□□□□ 0.23
DDX54-204ENST00000546898 WFIKKN2Q8TEU8 576 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 C18orf8Q96DM3 657 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 GABRG3Q99928 467 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 FAM204AQ9H8W3 233 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 ZDHHC4Q9NPG8 344 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.51■□□□□ 0.23
DDX54-204ENST00000546898 RRN3Q9NYV6 651 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 NOCTQ9UK39 431 aaKnown RBP16.51■□□□□ 0.23
DDX54-204ENST00000546898 HCN2Q9UL51 889 aa16.51■□□□□ 0.23
DDX54-204ENST00000546898 THADAQ6YHU6 1953 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 SYCE3A1L190 88 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 RETP07949 1114 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 MMEP08473 750 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 SLC2A3P11169 496 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 SLC6A4P31645 630 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 NOS2P35228 1153 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 NOMO3P69849 1222 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 CDR2Q01850 454 aa16.5■□□□□ 0.23
DDX54-204ENST00000546898 MTA1Q13330 715 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms