RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ITIH3Q06033 890 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 BST2Q10589 180 aaKnown RBP6.67□□□□□ -1.34
PRKDC-211ENST00000546304 SMAD4Q13485 552 aaKnown RBP6.67□□□□□ -1.34
PRKDC-211ENST00000546304 ASIC2Q16515 512 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 DDR2Q16832 855 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 SDHAF4Q5VUM1 108 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 TAF3Q5VWG9 929 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 CES5AQ6NT32 575 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 LCLAT1Q6UWP7 414 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 DENND5BQ6ZUT9 1274 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 TMC6Q7Z403 805 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 GPR149Q86SP6 731 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 NOP9Q86U38 636 aaKnown RBP6.67□□□□□ -1.34
PRKDC-211ENST00000546304 ITIH5Q86UX2 942 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 TMC8Q8IU68 726 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 PASD1Q8IV76 773 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 ELMOD1Q8N336 334 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 ANKRD52Q8NB46 1076 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 ZMIZ2Q8NF64 920 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 ZNF397Q8NF99 534 aaPredicted RBP6.67□□□□□ -1.34
PRKDC-211ENST00000546304 FEZF2Q8TBJ5 459 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 FBF1Q8TES7 1133 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 SLC20A1Q8WUM9 679 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 PSMG2Q969U7 264 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 SPATA17Q96L03 361 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 C8orf48Q96LL4 319 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 CEP295NLQ96MC4 621 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 SMOQ99835 787 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 DUSP16Q9BY84 665 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 ADAM7Q9H2U9 754 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 GRPEL1Q9HAV7 217 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 PIDD1Q9HB75 910 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 CSNK1G1Q9HCP0 422 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 ASAH2Q9NR71 780 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 THEGQ9P2T0 379 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 CDH22Q9UJ99 828 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 NOCTQ9UK39 431 aaKnown RBP6.67□□□□□ -1.34
PRKDC-211ENST00000546304 COG5Q9UP83 839 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 ASB3Q9Y575 518 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 CEP83Q9Y592 693 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 CLUHO75153 1309 aa6.67□□□□□ -1.34
PRKDC-211ENST00000546304 TCF20Q9UGU0 1960 aaKnown RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CCDC195A0A1B0GUA6 201 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 SLC38A8A6NNN8 435 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 TULP2O00295 520 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 XPO1O14980 1071 aaKnown RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 HYAL3O43820 417 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 TADA3O75528 432 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 BEST1O76090 585 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 ADCY5O95622 1261 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 LSM8O95777 96 aaKnown RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CTSBP07858 339 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 RHOP08100 348 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CSH1P0DML2 217 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CSH2P0DML3 217 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CASP14P31944 242 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 KRT9P35527 623 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 EPHA5P54756 1037 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 ZBED6P86452 979 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CDR2Q01850 454 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 TFF2Q03403 129 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 ADIGQ0VDE8 80 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 IFRD2Q12894 506 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 PDCLQ13371 301 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CBX2Q14781 532 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CNGA2Q16280 664 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 TAF12Q16514 161 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 LEXMQ3ZCV2 418 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 PABPC1LQ4VXU2 614 aaKnown RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 TDRD12Q587J7 1177 aaKnown RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 SFMBT2Q5VUG0 894 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 DENND1BQ6P3S1 775 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CYP26C1Q6V0L0 522 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 GPRIN1Q7Z2K8 1008 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 GRASPQ7Z6J2 395 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 PIGZQ86VD9 579 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 ZNF677Q86XU0 584 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CNGA4Q8IV77 575 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 LEMD2Q8NC56 503 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 C2CD4AQ8NCU7 369 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 C1orf131Q8NDD1 294 aaKnown RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 GIPC2Q8TF65 315 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CPLX3Q8WVH0 158 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 ZNF606Q8WXB4 792 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 DDX1Q92499 740 aaKnown RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 SUSD6Q92537 303 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 SYN2Q92777 582 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 SECISBP2LQ93073 1101 aaKnown RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 TRMT2BQ96GJ1 504 aaKnown RBP6.66□□□□□ -1.34
PRKDC-211ENST00000546304 RIPOR3Q96MK2 946 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 NECTIN4Q96NY8 510 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 GCNAQ96QF7 691 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 KCNK16Q96T55 309 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 DNAJC7Q99615 494 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 CORO1BQ9BR76 489 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 TTLL2Q9BWV7 592 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 S1PR5Q9H228 398 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 PDCL3Q9H2J4 239 aa6.66□□□□□ -1.34
PRKDC-211ENST00000546304 KCNF1Q9H3M0 494 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms