RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CHST12Q9NRB3 414 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 ADA2Q9NZK5 511 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 LRCH1Q9Y2L9 728 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 ATRNL1Q5VV63 1379 aa10.1□□□□□ -0.79
TRAF1-203ENST00000546084 TNRC6CQ9HCJ0 1690 aaKnown RBP10.1□□□□□ -0.79
TRAF1-203ENST00000546084 EEF2KO00418 725 aaKnown RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 GSC2O15499 205 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 TBC1D12O60347 775 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 MAFO75444 373 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PSMB4P28070 264 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 SLC34A1Q06495 639 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PLEKHG4Q58EX7 1191 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 CELF3Q5SZQ8 465 aaKnown RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 N4BP2L1Q5TBK1 243 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 CDCA2Q69YH5 1023 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 TP53INP2Q8IXH6 220 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 GPRC5AQ8NFJ5 357 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 RDM1Q8NG50 284 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 OR52K1Q8NGK4 314 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PTPRN2Q92932 1015 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 MTBPQ96DY7 904 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PCYT2Q99447 389 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 GPR20Q99678 358 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 TUBB6Q9BUF5 446 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 RNF39Q9H2S5 420 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 BFARQ9NZS9 450 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 SLC24A2Q9UI40 661 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 NHSL1Q5SYE7 1610 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 MAP1BP46821 2468 aaKnown RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 E7ENQ6 273 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PRPF4O43172 522 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 MSCO60682 206 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 ABHD2P08910 425 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 GNAZP19086 355 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 SP100P23497 879 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PITX1P78337 314 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 DLG2Q15700 870 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 WSCD1Q658N2 575 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 ATG16L1Q676U5 607 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PHF13Q86YI8 300 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 GAD1Q99259 594 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 FSD1LQ9BXM9 530 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 RHOBTB2Q9BYZ6 727 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 NMUR2Q9GZQ4 415 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 ETNK2Q9NVF9 386 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PAK5Q9P286 719 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 SIGLEC16A6NMB1 481 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 LIN7AO14910 233 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 TBX10O75333 385 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PSMG1O95456 288 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 CYP1A1P04798 512 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 IQCF3P0C7M6 154 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PIRTP0C851 137 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 SNX16P57768 344 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 TNFAIP2Q03169 654 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 USP10Q14694 798 aaKnown RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 RPS6KA2Q15349 733 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 CCNJLQ8IV13 435 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 SLC4A11Q8NBS3 891 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 ANKRD27Q96NW4 1050 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 MIPEPQ99797 713 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 DNAI2Q9GZS0 605 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PIF1Q9H611 641 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 CDHR5Q9HBB8 845 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 IARS2Q9NSE4 1012 aaKnown RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 BARX2Q9UMQ3 279 aaPredicted RBP10.09□□□□□ -0.79
TRAF1-203ENST00000546084 CEP290O15078 2479 aa10.09□□□□□ -0.79
TRAF1-203ENST00000546084 PDHXO00330 501 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 ALOX15BO15296 676 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 DCXO43602 365 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 LYPLA2O95372 231 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 TRUB2O95900 331 aaKnown RBP10.08□□□□□ -0.8
TRAF1-203ENST00000546084 FGFR1P11362 822 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 VDRP11473 427 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 KLRC2P26717 231 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 ARL2P36404 184 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 FKBP1AP62942 108 aaKnown RBP10.08□□□□□ -0.8
TRAF1-203ENST00000546084 KLF1Q13351 362 aaPredicted RBP10.08□□□□□ -0.8
TRAF1-203ENST00000546084 TCEAL1Q15170 157 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 SLC10A6Q3KNW5 377 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 TMEM259Q4ZIN3 620 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 XYLT1Q86Y38 959 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 C12orf56Q8IXR9 622 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 WDTC1Q8N5D0 677 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 GSDMBQ8TAX9 411 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 DENND1AQ8TEH3 1009 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 WDR60Q8WVS4 1066 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 SAR1AQ9NR31 198 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 KRT82Q9NSB4 513 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 MTO1Q9Y2Z2 717 aaKnown RBP10.08□□□□□ -0.8
TRAF1-203ENST00000546084 COQ4Q9Y3A0 265 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 WASF2Q9Y6W5 498 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 KLHL33A6NCF5 533 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 RNF103O00237 685 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 ATP6V1B1P15313 513 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 ACADSP16219 412 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 TGM2P21980 687 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 TKTL1P51854 596 aa10.08□□□□□ -0.8
TRAF1-203ENST00000546084 NSUN2Q08J23 767 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRAF1-203ENST00000546084 IZUMO2Q6UXV1 221 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms