RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 SMPD4Q9NXE4 827 aa4.29□□□□□ -1.72
MDM1-215ENST00000545964 RBAKQ9NYW8 714 aaPredicted RBP4.29□□□□□ -1.72
MDM1-215ENST00000545964 TRPM5Q9NZQ8 1165 aa4.29□□□□□ -1.72
MDM1-215ENST00000545964 CHORDC1Q9UHD1 332 aaPredicted RBP4.29□□□□□ -1.72
MDM1-215ENST00000545964 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.29□□□□□ -1.72
MDM1-215ENST00000545964 PCDHGA5Q9Y5G8 931 aa4.29□□□□□ -1.72
MDM1-215ENST00000545964 CHD8Q9HCK8 2581 aa4.29□□□□□ -1.72
MDM1-215ENST00000545964 TRIP11Q15643 1979 aa4.29□□□□□ -1.72
MDM1-215ENST00000545964 DNAH14Q0VDD8 3507 aa4.29□□□□□ -1.72
MDM1-215ENST00000545964 ACACBO00763 2458 aa4.29□□□□□ -1.72
MDM1-215ENST00000545964 MIA3Q5JRA6 1907 aa4.29□□□□□ -1.72
MDM1-215ENST00000545964 TPRP12270 2363 aaKnown RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 SDK1Q7Z5N4 2213 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 LOC100289279A0A1B0GTE1 492 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 TBC1D3BA6NDS4 549 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 PATE3B3GLJ2 98 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 K7EQS6 105 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 LEFTY2O00292 366 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 AKAP3O75969 853 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 ALDH1A2O94788 518 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 NOL4O94818 638 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 KLF8O95600 359 aaPredicted RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 NFATC1O95644 943 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 DLGAP3O95886 979 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 TOP3BO95985 862 aaKnown RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 CST3P01034 146 aaPredicted RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 TMEM253P0C7T8 217 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 PTPN1P18031 435 aaKnown RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 TNNI1P19237 187 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 BCKDHBP21953 392 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 GARTP22102 1010 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 ANXA13P27216 316 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 PCSK1P29120 753 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 PMLP29590 882 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 MAPK8P45983 427 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 CASP5P51878 434 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 POU5F1Q01860 360 aaKnown RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 GSTM4Q03013 218 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 PCDH1Q08174 1060 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 TAF10Q12962 218 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 ZNF268Q14587 947 aaPredicted RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 ZNF77Q15935 545 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 IFI16Q16666 785 aaKnown RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 ZNF423Q2M1K9 1284 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 MDH1BQ5I0G3 518 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 L1TD1Q5T7N2 865 aaKnown RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 TDRD10Q5VZ19 366 aaKnown RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 FAM171BQ6P995 826 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 RHBDF2Q6PJF5 856 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 C4orf50Q6ZRC1 276 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 CCDC73Q6ZRK6 1079 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 DENND5BQ6ZUT9 1274 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 FILIP1Q7Z7B0 1213 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 SFTPA1Q8IWL2 248 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 TMEFF1Q8IYR6 380 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 ADGRF2Q8IZF7 708 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 GPD1LQ8N335 351 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 ALLCQ8N6M5 410 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 TOP6BLQ8N6T0 577 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 LRRC52Q8N7C0 313 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 FRMD1Q8N878 549 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 NAT16Q8N8M0 369 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 TXNDC5Q8NBS9 432 aaKnown RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 OR5B17Q8NGF7 314 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 OR6B3Q8NGW1 331 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 CCDC26Q8TAB7 109 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 USP33Q8TEY7 942 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 HMGB4Q8WW32 186 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 KCNN1Q92952 543 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 HPS3Q969F9 1004 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 CCDC74AQ96AQ1 378 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 CCDC127Q96BQ5 260 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 HVCN1Q96D96 273 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 DNAJC19Q96DA6 116 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 ERLEC1Q96DZ1 483 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 TRMT2BQ96GJ1 504 aaKnown RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 HRASLS5Q96KN8 279 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 PNKPQ96T60 521 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 SYT15Q9BQS2 421 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 EDEM2Q9BV94 578 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 STRA6Q9BX79 667 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 RBCK1Q9BYM8 510 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 MTMR12Q9C0I1 747 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 CLEC4MQ9H2X3 399 aaPredicted RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 UPF2Q9HAU5 1272 aaKnown RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 ABCB6Q9NP58 842 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 TMEM9BQ9NQ34 198 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 CRTAC1Q9NQ79 661 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 INTS13Q9NVM9 706 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 GDAP2Q9NXN4 497 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 GCNT4Q9P109 453 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 BCCIPQ9P287 314 aaKnown RBP eCLIP4.28□□□□□ -1.72
MDM1-215ENST00000545964 CFAP97Q9P2B7 532 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 SEL1LQ9UBV2 794 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 EBF1Q9UH73 591 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 SIX4Q9UIU6 781 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 FBXO2Q9UK22 296 aaPredicted RBP4.28□□□□□ -1.72
MDM1-215ENST00000545964 ITGA11Q9UKX5 1188 aa4.28□□□□□ -1.72
MDM1-215ENST00000545964 CDH9Q9ULB4 789 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms