RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 AXIN1O15169 862 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 EPHB6O15197 1021 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 IRAK2O43187 625 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 HRO43593 1189 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 ACSL4O60488 711 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 TSPAN3O60637 253 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 CAVIN2O95810 425 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 TRUB2O95900 331 aaKnown RBP16.35■□□□□ 0.21
CCDC78-216ENST00000544996 CISD3P0C7P0 127 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 CDR2Q01850 454 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 E2F5Q15329 346 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 OLFML1Q6UWY5 402 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 PRR23BQ6ZRT6 265 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 CEP68Q76N32 757 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 SLC26A9Q7LBE3 791 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 CACNA2D4Q7Z3S7 1137 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 TAC4Q86UU9 113 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 DEFB106AQ8N104 65 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 C18orf8Q96DM3 657 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 PIWIL1Q96J94 861 aaKnown RBP16.35■□□□□ 0.21
CCDC78-216ENST00000544996 FAM204AQ9H8W3 233 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 NCDNQ9UBB6 729 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 SLC12A6Q9UHW9 1150 aa16.35■□□□□ 0.21
CCDC78-216ENST00000544996 TYW5A2RUC4 315 aaKnown RBP16.34■□□□□ 0.21
CCDC78-216ENST00000544996 ANTXRLA6NF34 631 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 SGK1O00141 431 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 ZBTB24O43167 697 aaPredicted RBP16.34■□□□□ 0.21
CCDC78-216ENST00000544996 GRAP2O75791 330 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 RPP40O75818 363 aaKnown RBP16.34■□□□□ 0.21
CCDC78-216ENST00000544996 MMEP08473 750 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 SLC2A3P11169 496 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 NTSR1P30989 418 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 HOXC13P31276 330 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 ANKS1BQ7Z6G8 1248 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 CHPFQ8IZ52 775 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 UCMAQ8WVF2 138 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 GAB3Q8WWW8 586 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 SLC39A13Q96H72 371 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 FCRL2Q96LA5 508 aaPredicted RBP16.34■□□□□ 0.21
CCDC78-216ENST00000544996 SLC2A13Q96QE2 648 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.34■□□□□ 0.21
CCDC78-216ENST00000544996 NOCTQ9UK39 431 aaKnown RBP16.34■□□□□ 0.21
CCDC78-216ENST00000544996 GMEB2Q9UKD1 530 aa16.34■□□□□ 0.21
CCDC78-216ENST00000544996 ZFHX2Q9C0A1 2572 aaPredicted RBP16.33■□□□□ 0.21
CCDC78-216ENST00000544996 PRRT4C9JH25 899 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 TIMM44O43615 452 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 MOCS2O96007 188 aaPredicted RBP16.33■□□□□ 0.2
CCDC78-216ENST00000544996 IGLV3-25P01717 112 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 CCDC172P0C7W6 258 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 HOXD9P28356 352 aaPredicted RBP16.33■□□□□ 0.2
CCDC78-216ENST00000544996 NOS2P35228 1153 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 GABRB2P47870 512 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 SRSF5Q13243 272 aaKnown RBP16.33■□□□□ 0.2
CCDC78-216ENST00000544996 MTA1Q13330 715 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 ZC3H12AQ5D1E8 599 aaKnown RBP16.33■□□□□ 0.2
CCDC78-216ENST00000544996 MPP7Q5T2T1 576 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 PIK3R6Q5UE93 754 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 NAA35Q5VZE5 725 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 EGFLAMQ63HQ2 1017 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 LAIR1Q6GTX8 287 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 ANO7Q6IWH7 933 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 RFWD3Q6PCD5 774 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 TRIM72Q6ZMU5 477 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 CCDC117Q8IWD4 279 aaPredicted RBP16.33■□□□□ 0.2
CCDC78-216ENST00000544996 ZNF557Q8N988 423 aaPredicted RBP16.33■□□□□ 0.2
CCDC78-216ENST00000544996 HJURPQ8NCD3 748 aaPredicted RBP16.33■□□□□ 0.2
CCDC78-216ENST00000544996 ZNF397Q8NF99 534 aaPredicted RBP16.33■□□□□ 0.2
CCDC78-216ENST00000544996 CPA5Q8WXQ8 436 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 RNF34Q969K3 372 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 P2RY11Q96G91 374 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 BTN2A3PQ96KV6 586 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 ZDHHC4Q9NPG8 344 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.2
CCDC78-216ENST00000544996 DDIT4Q9NX09 232 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 RRN3Q9NYV6 651 aa16.33■□□□□ 0.2
CCDC78-216ENST00000544996 SYNJ2BP-COX16A0A087WUM0 186 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 GOLGA6L7A0A1B0GV03 622 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 GFRA2O00451 464 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 NPC1O15118 1278 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 ADAM23O75077 832 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 DAB1O75553 588 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 SERPINC1P01008 464 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 CHRM1P11229 460 aaPredicted RBP16.32■□□□□ 0.2
CCDC78-216ENST00000544996 HOXB2P14652 356 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 ABCB4P21439 1286 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 CCR1P32246 355 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 SCNN1AP37088 669 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 RNASE9P60153 205 aaKnown RBP16.32■□□□□ 0.2
CCDC78-216ENST00000544996 ARID5AQ03989 594 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 IQCB1Q15051 598 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 EIF4HQ15056 248 aaKnown RBP16.32■□□□□ 0.2
CCDC78-216ENST00000544996 LPAL2Q16609 132 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 GEN1Q17RS7 908 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 USP39Q53GS9 565 aaKnown RBP16.32■□□□□ 0.2
CCDC78-216ENST00000544996 FAM133BQ5BKY9 247 aaKnown RBP16.32■□□□□ 0.2
CCDC78-216ENST00000544996 FAM102AQ5T9C2 384 aaPredicted RBP16.32■□□□□ 0.2
CCDC78-216ENST00000544996 TMEM92Q6UXU6 159 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 ATP6V0D2Q8N8Y2 350 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 SLC20A1Q8WUM9 679 aa16.32■□□□□ 0.2
CCDC78-216ENST00000544996 TMEM51Q9NW97 253 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms