RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 MIOSQ9NXC5 875 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 PAK5Q9P286 719 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 USH1CQ9Y6N9 552 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 E7ESA3 106 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 HUS1O60921 280 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 UNC5CO95185 931 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 ANP32DO95626 131 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 SERPINB4P48594 390 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 CHI3L2Q15782 390 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 TMEM120AQ9BXJ8 343 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 FOXP3Q9BZS1 431 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 PRDM12Q9H4Q4 367 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 A0A0G2JMZ2 1700 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 LRRC37A2A6NM11 1700 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 CAPN9O14815 690 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 LILRA4P59901 499 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 RPL10AP62906 217 aaKnown RBP16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 TRIM68Q6AZZ1 485 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 USP50Q70EL3 339 aaPredicted RBP16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 TDRPQ86YL5 185 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 COLGALT1Q8NBJ5 622 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 C3orf58Q8NDZ4 430 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 TBC1D10AQ9BXI6 508 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 NFKBIZQ9BYH8 718 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 SIK2Q9H0K1 926 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 LRRC4Q9HBW1 653 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 KRT82Q9NSB4 513 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 PIGVQ9NUD9 493 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 G3BP2Q9UN86 482 aaKnown RBP16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 HMX2A2RU54 273 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 YJEFN3A6XGL0 299 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 E7ENQ6 273 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 ATP9BO43861 1147 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 POMCP01189 267 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 BST2Q10589 180 aaKnown RBP16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 CAPRIN2Q6IMN6 1127 aaKnown RBP16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 CMC1Q7Z7K0 106 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 PGBD4Q96DM1 585 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 ULBP1Q9BZM6 244 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 SH3BP1Q9Y3L3 701 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 ACTL7BQ9Y614 415 aa16.29■□□□□ 0.2
SNRNP70-203ENST00000544278 TKTL1P51854 596 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 MRPS5P82675 430 aaKnown RBP16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 PID1Q7Z2X4 250 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 B3GALNT2Q8NCR0 500 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 UPF1Q92900 1129 aaKnown RBP eCLIP16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 VRTNQ9H8Y1 702 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.28■□□□□ 0.24e-8■□□□□ 9.6
SNRNP70-203ENST00000544278 PCDH10Q9P2E7 1040 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 IQANK1A0A1B0GTG1 560 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 RNF103O00237 685 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 CACNB2Q08289 660 aaPredicted RBP16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 BST1Q10588 318 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 ZBTB6Q15916 424 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 ANKRD20A2Q5SQ80 823 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 ANKRD20A1Q5TYW2 823 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 ANKRD20A3Q5VUR7 823 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 ANKRD52Q8NB46 1076 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 SMG8Q8ND04 991 aaKnown RBP16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 DTX3LQ8TDB6 740 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 SLC7A6OSQ96CW6 309 aaPredicted RBP16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 ARHGEF4Q9NR80 690 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 STARD13Q9Y3M8 1113 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 PTGESO14684 152 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 SRGAP2BP0DMP2 458 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 CLCNKBP51801 687 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 DLG2Q15700 870 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 UBXN11Q5T124 520 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 EFCAB3Q8N7B9 438 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 SIGLEC10Q96LC7 697 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 EFR3BQ9Y2G0 817 aa16.28■□□□□ 0.2
SNRNP70-203ENST00000544278 ARL4AP40617 200 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 TAF6P49848 677 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 ARFIP2P53365 341 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 KDSRQ06136 332 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 FYB2Q5VWT5 728 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 RNF43Q68DV7 783 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 TLDC1Q6P9B6 456 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 PAQR9Q6ZVX9 377 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 SLC26A11Q86WA9 606 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 OR52K1Q8NGK4 314 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 P2RY11Q96G91 374 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 CLPTM1LQ96KA5 538 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 MIPEPQ99797 713 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 EBF4Q9BQW3 602 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 CAB39LQ9H9S4 337 aa16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 UBQLN1Q9UMX0 589 aaKnown RBP16.27■□□□□ 0.2
SNRNP70-203ENST00000544278 GSTA1P08263 222 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 NCAM1P13591 858 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 BRCC3P46736 316 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 SCNN1GP51170 649 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 BCAT1P54687 386 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 PEX6Q13608 980 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 SLC9A4Q6AI14 798 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 RSPH3Q86UC2 560 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 SIX6OS1Q8N1H7 587 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 HTR3CQ8WXA8 447 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 NMUR2Q9GZQ4 415 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 ARHGEF3Q9NR81 526 aa16.27■□□□□ 0.19
SNRNP70-203ENST00000544278 SYBUQ9NX95 663 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms