RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 ANKRD52Q8NB46 1076 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 SETD7Q8WTS6 366 aaKnown RBP23.67■■□□□ 1.38
CDKN3-207ENST00000543789 PLD4Q96BZ4 506 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 IL21RQ9HBE5 538 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 PCOLCE2Q9UKZ9 415 aa23.67■■□□□ 1.38
CDKN3-207ENST00000543789 CER1O95813 267 aa23.66■■□□□ 1.38
CDKN3-207ENST00000543789 ZBED1O96006 694 aa23.66■■□□□ 1.38
CDKN3-207ENST00000543789 ZNF883P0CG24 379 aa23.66■■□□□ 1.38
CDKN3-207ENST00000543789 MATKP42679 507 aa23.66■■□□□ 1.38
CDKN3-207ENST00000543789 HARS2P49590 506 aaKnown RBP23.66■■□□□ 1.38
CDKN3-207ENST00000543789 TKTL1P51854 596 aa23.66■■□□□ 1.38
CDKN3-207ENST00000543789 MCCD1P59942 119 aaPredicted RBP23.66■■□□□ 1.38
CDKN3-207ENST00000543789 TRIP4Q15650 581 aaPredicted RBP23.66■■□□□ 1.38
CDKN3-207ENST00000543789 PM20D1Q6GTS8 502 aa23.66■■□□□ 1.38
CDKN3-207ENST00000543789 SLCO6A1Q86UG4 719 aa23.66■■□□□ 1.38
CDKN3-207ENST00000543789 FAM217AQ8IXS0 508 aa23.66■■□□□ 1.38
CDKN3-207ENST00000543789 FBXL13Q8NEE6 735 aa23.66■■□□□ 1.38
CDKN3-207ENST00000543789 ARID3AQ99856 593 aa23.66■■□□□ 1.38
CDKN3-207ENST00000543789 RAB20Q9NX57 234 aa23.66■■□□□ 1.38
CDKN3-207ENST00000543789 EIF2B4Q9UI10 523 aaKnown RBP23.66■■□□□ 1.38
CDKN3-207ENST00000543789 ADAMTS9Q9P2N4 1935 aa23.65■■□□□ 1.38
CDKN3-207ENST00000543789 DPYDQ12882 1025 aa23.65■■□□□ 1.38
CDKN3-207ENST00000543789 HLA-BQ31612 363 aa23.65■■□□□ 1.38
CDKN3-207ENST00000543789 MPPE1Q53F39 396 aa23.65■■□□□ 1.38
CDKN3-207ENST00000543789 CACUL1Q86Y37 369 aa23.65■■□□□ 1.38
CDKN3-207ENST00000543789 OR2T3Q8NH03 318 aa23.65■■□□□ 1.38
CDKN3-207ENST00000543789 C1orf216Q8TAB5 229 aa23.65■■□□□ 1.38
CDKN3-207ENST00000543789 PCED1AQ9H1Q7 454 aa23.65■■□□□ 1.38
CDKN3-207ENST00000543789 TM7SF3Q9NS93 570 aa23.65■■□□□ 1.38
CDKN3-207ENST00000543789 DMXL2Q8TDJ6 3036 aa23.65■■□□□ 1.38
CDKN3-207ENST00000543789 ZFYVE26Q68DK2 2539 aa23.64■■□□□ 1.38
CDKN3-207ENST00000543789 ATRXP46100 2492 aa23.64■■□□□ 1.37
CDKN3-207ENST00000543789 PKD1L2Q7Z442 2459 aa23.64■■□□□ 1.37
CDKN3-207ENST00000543789 MXI1P50539 228 aa23.64■■□□□ 1.37
CDKN3-207ENST00000543789 NDUFA8P51970 172 aa23.64■■□□□ 1.37
CDKN3-207ENST00000543789 BNC1Q01954 994 aa23.64■■□□□ 1.37
CDKN3-207ENST00000543789 FAM124AQ86V42 546 aa23.64■■□□□ 1.37
CDKN3-207ENST00000543789 FMNL3Q8IVF7 1028 aa23.64■■□□□ 1.37
CDKN3-207ENST00000543789 NDRG1Q92597 394 aaKnown RBP23.64■■□□□ 1.37
CDKN3-207ENST00000543789 TATDN2Q93075 761 aa23.64■■□□□ 1.37
CDKN3-207ENST00000543789 SPATA32Q96LK8 384 aa23.64■■□□□ 1.37
CDKN3-207ENST00000543789 ULBP1Q9BZM6 244 aa23.64■■□□□ 1.37
CDKN3-207ENST00000543789 OLA1Q9NTK5 396 aaKnown RBP23.64■■□□□ 1.37
CDKN3-207ENST00000543789 KIAA1522Q9P206 1035 aaPredicted RBP23.64■■□□□ 1.37
CDKN3-207ENST00000543789 PLA2G4CQ9UP65 541 aa23.64■■□□□ 1.37
CDKN3-207ENST00000543789 FAM237AA0A1B0GTK4 181 aa23.63■■□□□ 1.37
CDKN3-207ENST00000543789 STX10O60499 249 aa23.63■■□□□ 1.37
CDKN3-207ENST00000543789 HLA-EP13747 358 aa23.63■■□□□ 1.37
CDKN3-207ENST00000543789 HOXD9P28356 352 aaPredicted RBP23.63■■□□□ 1.37
CDKN3-207ENST00000543789 CAMK2GQ13555 558 aaPredicted RBP23.63■■□□□ 1.37
CDKN3-207ENST00000543789 TMA16Q96EY4 203 aaKnown RBP23.63■■□□□ 1.37
CDKN3-207ENST00000543789 CCDC86Q9H6F5 360 aaKnown RBP23.63■■□□□ 1.37
CDKN3-207ENST00000543789 LRRC4Q9HBW1 653 aa23.63■■□□□ 1.37
CDKN3-207ENST00000543789 FNDC3AQ9Y2H6 1198 aaKnown RBP23.63■■□□□ 1.37
CDKN3-207ENST00000543789 HBS1LQ9Y450 684 aaKnown RBP23.63■■□□□ 1.37
CDKN3-207ENST00000543789 CEP192Q8TEP8 1941 aa23.63■■□□□ 1.37
CDKN3-207ENST00000543789 A0A1B0GVT2 93 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 XPO1O14980 1071 aaKnown RBP23.62■■□□□ 1.37
CDKN3-207ENST00000543789 TSPAN3O60637 253 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 HLA-FP30511 346 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 ZNF445P59923 1031 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 EDRF1Q3B7T1 1238 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 ZCWPW2Q504Y3 356 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 DBX2Q6ZNG2 339 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 RHBDD1Q8TEB9 315 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 WFIKKN2Q8TEU8 576 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 RNF139Q8WU17 664 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 SNX19Q92543 992 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 EEF2KMTQ96G04 330 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 CDC6Q99741 560 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 LHX5Q9H2C1 402 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 TMEM245Q9H330 911 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 PCDHGB2Q9Y5G2 931 aa23.62■■□□□ 1.37
CDKN3-207ENST00000543789 TULP2O00295 520 aa23.61■■□□□ 1.37
CDKN3-207ENST00000543789 EPB41P11171 864 aaKnown RBP23.61■■□□□ 1.37
CDKN3-207ENST00000543789 CSNK1EP49674 416 aaKnown RBP23.61■■□□□ 1.37
CDKN3-207ENST00000543789 AFF3P51826 1226 aaKnown RBP23.61■■□□□ 1.37
CDKN3-207ENST00000543789 PDE4CQ08493 712 aa23.61■■□□□ 1.37
CDKN3-207ENST00000543789 SUZ12Q15022 739 aaKnown RBP23.61■■□□□ 1.37
CDKN3-207ENST00000543789 GOLGA7BQ2TAP0 167 aa23.61■■□□□ 1.37
CDKN3-207ENST00000543789 FNDC3BQ53EP0 1204 aaKnown RBP23.61■■□□□ 1.37
CDKN3-207ENST00000543789 BSPRYQ5W0U4 402 aa23.61■■□□□ 1.37
CDKN3-207ENST00000543789 BHLHA9Q7RTU4 235 aa23.61■■□□□ 1.37
CDKN3-207ENST00000543789 CYB5D2Q8WUJ1 264 aa23.61■■□□□ 1.37
CDKN3-207ENST00000543789 IPO9Q96P70 1041 aaKnown RBP23.61■■□□□ 1.37
CDKN3-207ENST00000543789 C6orf106Q9H6K1 298 aaPredicted RBP23.61■■□□□ 1.37
CDKN3-207ENST00000543789 SFMBT1Q9UHJ3 866 aa23.61■■□□□ 1.37
CDKN3-207ENST00000543789 STOML2Q9UJZ1 356 aa23.61■■□□□ 1.37
CDKN3-207ENST00000543789 TSPAN16Q9UKR8 245 aa23.61■■□□□ 1.37
CDKN3-207ENST00000543789 GPSM3Q9Y4H4 160 aa23.61■■□□□ 1.37
CDKN3-207ENST00000543789 MYH10P35580 1976 aa23.61■■□□□ 1.37
CDKN3-207ENST00000543789 CETN3O15182 167 aa23.6■■□□□ 1.37
CDKN3-207ENST00000543789 ACSL1P33121 698 aa23.6■■□□□ 1.37
CDKN3-207ENST00000543789 BCAT1P54687 386 aa23.6■■□□□ 1.37
CDKN3-207ENST00000543789 KRT85P78386 507 aa23.6■■□□□ 1.37
CDKN3-207ENST00000543789 ADGRF1Q5T601 910 aa23.6■■□□□ 1.37
CDKN3-207ENST00000543789 KRBA2Q6ZNG9 492 aa23.6■■□□□ 1.37
CDKN3-207ENST00000543789 CHST9Q7L1S5 443 aa23.6■■□□□ 1.37
CDKN3-207ENST00000543789 EDEM1Q92611 657 aa23.6■■□□□ 1.37
CDKN3-207ENST00000543789 HESX1Q9UBX0 185 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms